Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HHLA3Q9XRX5 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HHLA3Q9XRX5 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
HHLA3Q9XRX5 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC14.19□□□□□ -0.14
HHLA3Q9XRX5 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC14.19□□□□□ -0.14
HHLA3Q9XRX5 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
HHLA3Q9XRX5 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HHLA3Q9XRX5 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC14.19□□□□□ -0.14
HHLA3Q9XRX5 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
HHLA3Q9XRX5 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HHLA3Q9XRX5 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
HHLA3Q9XRX5 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
HHLA3Q9XRX5 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
HHLA3Q9XRX5 NCF1B-203ENST00000435988 1254 ntBASIC14.19□□□□□ -0.14
HHLA3Q9XRX5 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
HHLA3Q9XRX5 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
HHLA3Q9XRX5 C2orf69P4-201ENST00000565394 541 ntBASIC14.19□□□□□ -0.14
HHLA3Q9XRX5 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC14.19□□□□□ -0.14
HHLA3Q9XRX5 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC14.19□□□□□ -0.14
HHLA3Q9XRX5 WT1-AS_3.1-201ENST00000613262 234 ntBASIC14.19□□□□□ -0.14
HHLA3Q9XRX5 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
HHLA3Q9XRX5 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
HHLA3Q9XRX5 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HHLA3Q9XRX5 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
HHLA3Q9XRX5 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
HHLA3Q9XRX5 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
HHLA3Q9XRX5 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC14.19□□□□□ -0.14
HHLA3Q9XRX5 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
HHLA3Q9XRX5 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
HHLA3Q9XRX5 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HHLA3Q9XRX5 AP000997.3-201ENST00000623333 2250 ntBASIC14.18□□□□□ -0.14
HHLA3Q9XRX5 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HHLA3Q9XRX5 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC14.18□□□□□ -0.14
HHLA3Q9XRX5 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
HHLA3Q9XRX5 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
HHLA3Q9XRX5 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HHLA3Q9XRX5 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HHLA3Q9XRX5 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
HHLA3Q9XRX5 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
HHLA3Q9XRX5 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HHLA3Q9XRX5 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC14.18□□□□□ -0.14
HHLA3Q9XRX5 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC14.18□□□□□ -0.14
HHLA3Q9XRX5 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC14.18□□□□□ -0.14
HHLA3Q9XRX5 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
HHLA3Q9XRX5 GXYLT1P5-201ENST00000614548 1189 ntBASIC14.18□□□□□ -0.14
HHLA3Q9XRX5 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC14.18□□□□□ -0.14
HHLA3Q9XRX5 PFKL-212ENST00000628044 129 ntTSL 3 BASIC14.18□□□□□ -0.14
HHLA3Q9XRX5 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HHLA3Q9XRX5 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC14.18□□□□□ -0.14
HHLA3Q9XRX5 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HHLA3Q9XRX5 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HHLA3Q9XRX5 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
HHLA3Q9XRX5 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HHLA3Q9XRX5 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HHLA3Q9XRX5 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
HHLA3Q9XRX5 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HHLA3Q9XRX5 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC14.18□□□□□ -0.14
HHLA3Q9XRX5 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HHLA3Q9XRX5 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
HHLA3Q9XRX5 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HHLA3Q9XRX5 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HHLA3Q9XRX5 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC14.17□□□□□ -0.14
HHLA3Q9XRX5 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HHLA3Q9XRX5 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HHLA3Q9XRX5 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC14.17□□□□□ -0.14
HHLA3Q9XRX5 HLA-G-202ENST00000376815 851 ntBASIC14.17□□□□□ -0.14
HHLA3Q9XRX5 HLA-G-203ENST00000376818 1127 ntBASIC14.17□□□□□ -0.14
HHLA3Q9XRX5 MIPEPP3-201ENST00000412105 444 ntBASIC14.17□□□□□ -0.14
HHLA3Q9XRX5 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC14.17□□□□□ -0.14
HHLA3Q9XRX5 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
HHLA3Q9XRX5 AC090192.1-201ENST00000517740 490 ntBASIC14.17□□□□□ -0.14
HHLA3Q9XRX5 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HHLA3Q9XRX5 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HHLA3Q9XRX5 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC14.17□□□□□ -0.14
HHLA3Q9XRX5 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC14.17□□□□□ -0.14
HHLA3Q9XRX5 MARS-234ENST00000630571 216 ntTSL 5 BASIC14.17□□□□□ -0.14
HHLA3Q9XRX5 MARS-235ENST00000630803 183 ntTSL 3 BASIC14.17□□□□□ -0.14
HHLA3Q9XRX5 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HHLA3Q9XRX5 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HHLA3Q9XRX5 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HHLA3Q9XRX5 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HHLA3Q9XRX5 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HHLA3Q9XRX5 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HHLA3Q9XRX5 AL390961.4-201ENST00000623958 2535 ntBASIC14.16□□□□□ -0.14
HHLA3Q9XRX5 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC14.16□□□□□ -0.14
HHLA3Q9XRX5 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HHLA3Q9XRX5 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HHLA3Q9XRX5 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HHLA3Q9XRX5 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
HHLA3Q9XRX5 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HHLA3Q9XRX5 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
HHLA3Q9XRX5 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HHLA3Q9XRX5 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HHLA3Q9XRX5 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HHLA3Q9XRX5 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
HHLA3Q9XRX5 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
HHLA3Q9XRX5 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
HHLA3Q9XRX5 MAP2K4P1-201ENST00000438453 1195 ntBASIC14.16□□□□□ -0.14
HHLA3Q9XRX5 TSPY6P-201ENST00000448518 926 ntBASIC14.16□□□□□ -0.14
HHLA3Q9XRX5 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms