Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC10.67□□□□□ -0.7
SPTSSBQ8NFR3 GNL1-201ENST00000376621 7490 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SPTSSBQ8NFR3 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC10.67□□□□□ -0.7
SPTSSBQ8NFR3 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
SPTSSBQ8NFR3 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
SPTSSBQ8NFR3 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
SPTSSBQ8NFR3 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
SPTSSBQ8NFR3 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
SPTSSBQ8NFR3 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC10.67□□□□□ -0.7
SPTSSBQ8NFR3 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC10.67□□□□□ -0.7
SPTSSBQ8NFR3 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
SPTSSBQ8NFR3 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SPTSSBQ8NFR3 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC10.67□□□□□ -0.7
SPTSSBQ8NFR3 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
SPTSSBQ8NFR3 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SPTSSBQ8NFR3 ECEL1P2-201ENST00000461596 1295 ntBASIC10.67□□□□□ -0.7
SPTSSBQ8NFR3 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
SPTSSBQ8NFR3 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
SPTSSBQ8NFR3 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC10.67□□□□□ -0.7
SPTSSBQ8NFR3 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC10.67□□□□□ -0.7
SPTSSBQ8NFR3 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SPTSSBQ8NFR3 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
SPTSSBQ8NFR3 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SPTSSBQ8NFR3 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC10.67□□□□□ -0.7
SPTSSBQ8NFR3 C17orf82-201ENST00000623772 1530 ntBASIC10.67□□□□□ -0.7
SPTSSBQ8NFR3 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC10.67□□□□□ -0.7
SPTSSBQ8NFR3 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC10.67□□□□□ -0.7
SPTSSBQ8NFR3 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
SPTSSBQ8NFR3 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC10.67□□□□□ -0.7
SPTSSBQ8NFR3 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC10.67□□□□□ -0.7
SPTSSBQ8NFR3 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
SPTSSBQ8NFR3 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SPTSSBQ8NFR3 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC10.67□□□□□ -0.7
SPTSSBQ8NFR3 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC10.67□□□□□ -0.7
SPTSSBQ8NFR3 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
SPTSSBQ8NFR3 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC10.67□□□□□ -0.7
SPTSSBQ8NFR3 KCP-203ENST00000610776 5108 ntTSL 5 BASIC10.67□□□□□ -0.7
SPTSSBQ8NFR3 ME2-206ENST00000638410 2289 ntTSL 5 BASIC10.67□□□□□ -0.7
SPTSSBQ8NFR3 ME2-210ENST00000639255 2262 ntTSL 5 BASIC10.67□□□□□ -0.7
SPTSSBQ8NFR3 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
SPTSSBQ8NFR3 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC10.66□□□□□ -0.7
SPTSSBQ8NFR3 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
SPTSSBQ8NFR3 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SPTSSBQ8NFR3 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
SPTSSBQ8NFR3 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SPTSSBQ8NFR3 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC10.66□□□□□ -0.7
SPTSSBQ8NFR3 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SPTSSBQ8NFR3 MYO15B-237ENST00000642007 4893 ntBASIC10.66□□□□□ -0.7
SPTSSBQ8NFR3 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SPTSSBQ8NFR3 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
SPTSSBQ8NFR3 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
SPTSSBQ8NFR3 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
SPTSSBQ8NFR3 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SPTSSBQ8NFR3 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
SPTSSBQ8NFR3 AC087386.2-201ENST00000623212 4637 ntBASIC10.66□□□□□ -0.7
SPTSSBQ8NFR3 CEP85L-203ENST00000368491 7673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
SPTSSBQ8NFR3 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SPTSSBQ8NFR3 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
SPTSSBQ8NFR3 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC10.66□□□□□ -0.7
SPTSSBQ8NFR3 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
SPTSSBQ8NFR3 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC10.66□□□□□ -0.7
SPTSSBQ8NFR3 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SPTSSBQ8NFR3 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC10.66□□□□□ -0.7
SPTSSBQ8NFR3 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC10.66□□□□□ -0.7
SPTSSBQ8NFR3 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
SPTSSBQ8NFR3 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC10.66□□□□□ -0.7
SPTSSBQ8NFR3 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
SPTSSBQ8NFR3 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
SPTSSBQ8NFR3 PLK5-205ENST00000642079 1969 ntBASIC10.66□□□□□ -0.7
SPTSSBQ8NFR3 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SPTSSBQ8NFR3 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
SPTSSBQ8NFR3 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
SPTSSBQ8NFR3 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
SPTSSBQ8NFR3 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC10.66□□□□□ -0.7
SPTSSBQ8NFR3 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC10.66□□□□□ -0.7
SPTSSBQ8NFR3 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC10.66□□□□□ -0.7
SPTSSBQ8NFR3 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
SPTSSBQ8NFR3 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SPTSSBQ8NFR3 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SPTSSBQ8NFR3 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
SPTSSBQ8NFR3 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
SPTSSBQ8NFR3 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC10.65□□□□□ -0.7
SPTSSBQ8NFR3 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
SPTSSBQ8NFR3 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC10.65□□□□□ -0.7
SPTSSBQ8NFR3 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
SPTSSBQ8NFR3 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
SPTSSBQ8NFR3 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC10.65□□□□□ -0.7
SPTSSBQ8NFR3 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
SPTSSBQ8NFR3 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
SPTSSBQ8NFR3 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC10.65□□□□□ -0.7
SPTSSBQ8NFR3 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC10.65□□□□□ -0.7
SPTSSBQ8NFR3 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC10.65□□□□□ -0.7
SPTSSBQ8NFR3 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
SPTSSBQ8NFR3 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
SPTSSBQ8NFR3 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC10.65□□□□□ -0.7
SPTSSBQ8NFR3 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
SPTSSBQ8NFR3 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
SPTSSBQ8NFR3 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC10.65□□□□□ -0.7
SPTSSBQ8NFR3 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
SPTSSBQ8NFR3 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms