Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NPIPB4C9JG80 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NPIPB4C9JG80 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
NPIPB4C9JG80 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NPIPB4C9JG80 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NPIPB4C9JG80 SDHAP1-207ENST00000440850 2000 ntBASIC17.21■□□□□ 0.35
NPIPB4C9JG80 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC17.21■□□□□ 0.35
NPIPB4C9JG80 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
NPIPB4C9JG80 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NPIPB4C9JG80 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
NPIPB4C9JG80 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NPIPB4C9JG80 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NPIPB4C9JG80 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC17.21■□□□□ 0.35
NPIPB4C9JG80 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NPIPB4C9JG80 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NPIPB4C9JG80 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
NPIPB4C9JG80 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
NPIPB4C9JG80 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
NPIPB4C9JG80 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NPIPB4C9JG80 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
NPIPB4C9JG80 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC17.21■□□□□ 0.35
NPIPB4C9JG80 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC17.21■□□□□ 0.35
NPIPB4C9JG80 F2R-202ENST00000505600 442 ntTSL 2 BASIC17.21■□□□□ 0.35
NPIPB4C9JG80 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC17.21■□□□□ 0.35
NPIPB4C9JG80 TBCB-214ENST00000629269 413 ntTSL 5 BASIC17.21■□□□□ 0.35
NPIPB4C9JG80 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NPIPB4C9JG80 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.21■□□□□ 0.35
NPIPB4C9JG80 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NPIPB4C9JG80 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NPIPB4C9JG80 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC17.21■□□□□ 0.35
NPIPB4C9JG80 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC17.21■□□□□ 0.35
NPIPB4C9JG80 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NPIPB4C9JG80 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
NPIPB4C9JG80 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
NPIPB4C9JG80 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
NPIPB4C9JG80 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
NPIPB4C9JG80 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC17.2■□□□□ 0.34
NPIPB4C9JG80 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NPIPB4C9JG80 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NPIPB4C9JG80 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC17.2■□□□□ 0.34
NPIPB4C9JG80 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
NPIPB4C9JG80 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NPIPB4C9JG80 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NPIPB4C9JG80 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
NPIPB4C9JG80 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
NPIPB4C9JG80 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC17.2■□□□□ 0.34
NPIPB4C9JG80 AC133681.1-201ENST00000465482 601 ntBASIC17.2■□□□□ 0.34
NPIPB4C9JG80 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC17.2■□□□□ 0.34
NPIPB4C9JG80 ADM-205ENST00000528544 586 ntTSL 2 BASIC17.2■□□□□ 0.34
NPIPB4C9JG80 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC17.2■□□□□ 0.34
NPIPB4C9JG80 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NPIPB4C9JG80 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NPIPB4C9JG80 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
NPIPB4C9JG80 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
NPIPB4C9JG80 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NPIPB4C9JG80 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
NPIPB4C9JG80 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
NPIPB4C9JG80 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NPIPB4C9JG80 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
NPIPB4C9JG80 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NPIPB4C9JG80 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC17.2■□□□□ 0.34
NPIPB4C9JG80 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
NPIPB4C9JG80 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NPIPB4C9JG80 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NPIPB4C9JG80 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.19■□□□□ 0.34
NPIPB4C9JG80 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
NPIPB4C9JG80 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NPIPB4C9JG80 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NPIPB4C9JG80 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NPIPB4C9JG80 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NPIPB4C9JG80 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NPIPB4C9JG80 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NPIPB4C9JG80 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NPIPB4C9JG80 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NPIPB4C9JG80 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
NPIPB4C9JG80 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC17.19■□□□□ 0.34
NPIPB4C9JG80 ESRRAP1-201ENST00000400596 1257 ntBASIC17.19■□□□□ 0.34
NPIPB4C9JG80 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC17.19■□□□□ 0.34
NPIPB4C9JG80 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC17.19■□□□□ 0.34
NPIPB4C9JG80 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC17.19■□□□□ 0.34
NPIPB4C9JG80 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NPIPB4C9JG80 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NPIPB4C9JG80 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NPIPB4C9JG80 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
NPIPB4C9JG80 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NPIPB4C9JG80 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
NPIPB4C9JG80 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NPIPB4C9JG80 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC17.18■□□□□ 0.34
NPIPB4C9JG80 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
NPIPB4C9JG80 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NPIPB4C9JG80 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC17.18■□□□□ 0.34
NPIPB4C9JG80 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
NPIPB4C9JG80 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NPIPB4C9JG80 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NPIPB4C9JG80 AC239809.2-201ENST00000415381 517 ntBASIC17.18■□□□□ 0.34
NPIPB4C9JG80 KRT16P5-201ENST00000455284 522 ntBASIC17.18■□□□□ 0.34
NPIPB4C9JG80 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC17.18■□□□□ 0.34
NPIPB4C9JG80 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC17.18■□□□□ 0.34
NPIPB4C9JG80 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
NPIPB4C9JG80 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms