Protein–RNA interactions for Protein: A0A0A6YYK4

TRBV7-1, T-cell receptor beta variable 7-1 (non-functional) (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV7-1A0A0A6YYK4 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRBV7-1A0A0A6YYK4 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRBV7-1A0A0A6YYK4 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRBV7-1A0A0A6YYK4 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC15.1■□□□□ 0.01
TRBV7-1A0A0A6YYK4 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC15.1■□□□□ 0.01
TRBV7-1A0A0A6YYK4 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRBV7-1A0A0A6YYK4 ADM-205ENST00000528544 586 ntTSL 2 BASIC15.1■□□□□ 0.01
TRBV7-1A0A0A6YYK4 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRBV7-1A0A0A6YYK4 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC15.1■□□□□ 0.01
TRBV7-1A0A0A6YYK4 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
TRBV7-1A0A0A6YYK4 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC15.1■□□□□ 0.01
TRBV7-1A0A0A6YYK4 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRBV7-1A0A0A6YYK4 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRBV7-1A0A0A6YYK4 TP73-202ENST00000354437 2140 ntTSL 5 BASIC15.1■□□□□ 0.01
TRBV7-1A0A0A6YYK4 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRBV7-1A0A0A6YYK4 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRBV7-1A0A0A6YYK4 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRBV7-1A0A0A6YYK4 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC15.09■□□□□ 0.01
TRBV7-1A0A0A6YYK4 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC15.09■□□□□ 0.01
TRBV7-1A0A0A6YYK4 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC15.09■□□□□ 0.01
TRBV7-1A0A0A6YYK4 ANKRD18DP-204ENST00000455355 1975 ntBASIC15.09■□□□□ 0.01
TRBV7-1A0A0A6YYK4 ZNF815P-204ENST00000434898 1737 ntBASIC15.09■□□□□ 0.01
TRBV7-1A0A0A6YYK4 AC116562.4-201ENST00000641316 2276 ntBASIC15.09■□□□□ 0.01
TRBV7-1A0A0A6YYK4 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRBV7-1A0A0A6YYK4 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRBV7-1A0A0A6YYK4 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRBV7-1A0A0A6YYK4 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRBV7-1A0A0A6YYK4 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRBV7-1A0A0A6YYK4 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
TRBV7-1A0A0A6YYK4 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC15.09■□□□□ 0.01
TRBV7-1A0A0A6YYK4 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
TRBV7-1A0A0A6YYK4 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRBV7-1A0A0A6YYK4 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRBV7-1A0A0A6YYK4 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRBV7-1A0A0A6YYK4 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRBV7-1A0A0A6YYK4 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRBV7-1A0A0A6YYK4 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
TRBV7-1A0A0A6YYK4 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
TRBV7-1A0A0A6YYK4 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC15.09■□□□□ 0.01
TRBV7-1A0A0A6YYK4 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRBV7-1A0A0A6YYK4 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC15.09■□□□□ 0.01
TRBV7-1A0A0A6YYK4 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRBV7-1A0A0A6YYK4 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
TRBV7-1A0A0A6YYK4 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRBV7-1A0A0A6YYK4 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRBV7-1A0A0A6YYK4 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRBV7-1A0A0A6YYK4 AC005332.7-201ENST00000614046 2005 ntBASIC15.09■□□□□ 0.01
TRBV7-1A0A0A6YYK4 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC15.09■□□□□ 0.01
TRBV7-1A0A0A6YYK4 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
TRBV7-1A0A0A6YYK4 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
TRBV7-1A0A0A6YYK4 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC15.08■□□□□ 0
TRBV7-1A0A0A6YYK4 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
TRBV7-1A0A0A6YYK4 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
TRBV7-1A0A0A6YYK4 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRBV7-1A0A0A6YYK4 AC239809.2-201ENST00000415381 517 ntBASIC15.08■□□□□ 0
TRBV7-1A0A0A6YYK4 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC15.08■□□□□ 0
TRBV7-1A0A0A6YYK4 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRBV7-1A0A0A6YYK4 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC15.08■□□□□ 0
TRBV7-1A0A0A6YYK4 IRX5-204ENST00000560154 879 ntTSL 5 BASIC15.08■□□□□ 0
TRBV7-1A0A0A6YYK4 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC15.08■□□□□ 0
TRBV7-1A0A0A6YYK4 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC15.08■□□□□ 0
TRBV7-1A0A0A6YYK4 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC15.08■□□□□ 0
TRBV7-1A0A0A6YYK4 Six3os1_6.1-201ENST00000620790 196 ntBASIC15.08■□□□□ 0
TRBV7-1A0A0A6YYK4 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
TRBV7-1A0A0A6YYK4 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRBV7-1A0A0A6YYK4 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
TRBV7-1A0A0A6YYK4 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC15.08■□□□□ 0
TRBV7-1A0A0A6YYK4 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0
TRBV7-1A0A0A6YYK4 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
TRBV7-1A0A0A6YYK4 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRBV7-1A0A0A6YYK4 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC15.08■□□□□ 0
TRBV7-1A0A0A6YYK4 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC15.08■□□□□ 0
TRBV7-1A0A0A6YYK4 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC15.08■□□□□ 0
TRBV7-1A0A0A6YYK4 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRBV7-1A0A0A6YYK4 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC15.07■□□□□ 0
TRBV7-1A0A0A6YYK4 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC15.07■□□□□ 0
TRBV7-1A0A0A6YYK4 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRBV7-1A0A0A6YYK4 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRBV7-1A0A0A6YYK4 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC15.07■□□□□ 0
TRBV7-1A0A0A6YYK4 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRBV7-1A0A0A6YYK4 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC15.07■□□□□ 0
TRBV7-1A0A0A6YYK4 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC15.07■□□□□ 0
TRBV7-1A0A0A6YYK4 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC15.07■□□□□ 0
TRBV7-1A0A0A6YYK4 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRBV7-1A0A0A6YYK4 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC15.07■□□□□ 0
TRBV7-1A0A0A6YYK4 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
TRBV7-1A0A0A6YYK4 AC006058.3-201ENST00000606217 1069 ntBASIC15.07■□□□□ 0
TRBV7-1A0A0A6YYK4 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC15.07■□□□□ 0
TRBV7-1A0A0A6YYK4 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC15.07■□□□□ 0
TRBV7-1A0A0A6YYK4 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC15.07■□□□□ 0
TRBV7-1A0A0A6YYK4 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRBV7-1A0A0A6YYK4 Z82202.1-201ENST00000623446 1880 ntBASIC15.07■□□□□ 0
TRBV7-1A0A0A6YYK4 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
TRBV7-1A0A0A6YYK4 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC15.07■□□□□ 0
TRBV7-1A0A0A6YYK4 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
TRBV7-1A0A0A6YYK4 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC15.07■□□□□ 0
TRBV7-1A0A0A6YYK4 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRBV7-1A0A0A6YYK4 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC15.06■□□□□ 0
TRBV7-1A0A0A6YYK4 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
TRBV7-1A0A0A6YYK4 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC15.06■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms