Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RAB3IL1Q8TBN0 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
RAB3IL1Q8TBN0 AK1-201ENST00000223836 736 ntTSL 3 BASIC19.38■□□□□ 0.69
RAB3IL1Q8TBN0 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RAB3IL1Q8TBN0 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.38■□□□□ 0.69
RAB3IL1Q8TBN0 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RAB3IL1Q8TBN0 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RAB3IL1Q8TBN0 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RAB3IL1Q8TBN0 HLA-G-202ENST00000376815 851 ntBASIC19.38■□□□□ 0.69
RAB3IL1Q8TBN0 HLA-G-203ENST00000376818 1127 ntBASIC19.38■□□□□ 0.69
RAB3IL1Q8TBN0 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RAB3IL1Q8TBN0 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.38■□□□□ 0.69
RAB3IL1Q8TBN0 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
RAB3IL1Q8TBN0 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RAB3IL1Q8TBN0 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC19.38■□□□□ 0.69
RAB3IL1Q8TBN0 AC026471.1-201ENST00000564629 3026 ntBASIC19.38■□□□□ 0.69
RAB3IL1Q8TBN0 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC19.38■□□□□ 0.69
RAB3IL1Q8TBN0 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RAB3IL1Q8TBN0 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
RAB3IL1Q8TBN0 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RAB3IL1Q8TBN0 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
RAB3IL1Q8TBN0 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
RAB3IL1Q8TBN0 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
RAB3IL1Q8TBN0 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.37■□□□□ 0.69
RAB3IL1Q8TBN0 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
RAB3IL1Q8TBN0 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
RAB3IL1Q8TBN0 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RAB3IL1Q8TBN0 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.37■□□□□ 0.69
RAB3IL1Q8TBN0 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RAB3IL1Q8TBN0 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAB3IL1Q8TBN0 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAB3IL1Q8TBN0 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAB3IL1Q8TBN0 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC19.37■□□□□ 0.69
RAB3IL1Q8TBN0 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC19.37■□□□□ 0.69
RAB3IL1Q8TBN0 MIR5787-201ENST00000611784 55 ntBASIC19.37■□□□□ 0.69
RAB3IL1Q8TBN0 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAB3IL1Q8TBN0 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.37■□□□□ 0.69
RAB3IL1Q8TBN0 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RAB3IL1Q8TBN0 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
RAB3IL1Q8TBN0 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
RAB3IL1Q8TBN0 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.37■□□□□ 0.69
RAB3IL1Q8TBN0 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RAB3IL1Q8TBN0 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAB3IL1Q8TBN0 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAB3IL1Q8TBN0 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAB3IL1Q8TBN0 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAB3IL1Q8TBN0 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC19.37■□□□□ 0.69
RAB3IL1Q8TBN0 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAB3IL1Q8TBN0 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RAB3IL1Q8TBN0 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
RAB3IL1Q8TBN0 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
RAB3IL1Q8TBN0 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
RAB3IL1Q8TBN0 AC004854.2-201ENST00000608450 1441 ntBASIC19.36■□□□□ 0.69
RAB3IL1Q8TBN0 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RAB3IL1Q8TBN0 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RAB3IL1Q8TBN0 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RAB3IL1Q8TBN0 GAS2L1P2-201ENST00000436355 1356 ntBASIC19.36■□□□□ 0.69
RAB3IL1Q8TBN0 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
RAB3IL1Q8TBN0 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RAB3IL1Q8TBN0 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RAB3IL1Q8TBN0 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RAB3IL1Q8TBN0 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RAB3IL1Q8TBN0 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC19.36■□□□□ 0.69
RAB3IL1Q8TBN0 PBX1-209ENST00000485769 834 ntTSL 2 BASIC19.36■□□□□ 0.69
RAB3IL1Q8TBN0 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC19.36■□□□□ 0.69
RAB3IL1Q8TBN0 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RAB3IL1Q8TBN0 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RAB3IL1Q8TBN0 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RAB3IL1Q8TBN0 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.36■□□□□ 0.69
RAB3IL1Q8TBN0 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RAB3IL1Q8TBN0 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RAB3IL1Q8TBN0 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
RAB3IL1Q8TBN0 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RAB3IL1Q8TBN0 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RAB3IL1Q8TBN0 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.35■□□□□ 0.69
RAB3IL1Q8TBN0 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RAB3IL1Q8TBN0 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RAB3IL1Q8TBN0 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RAB3IL1Q8TBN0 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RAB3IL1Q8TBN0 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RAB3IL1Q8TBN0 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
RAB3IL1Q8TBN0 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
RAB3IL1Q8TBN0 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.35■□□□□ 0.69
RAB3IL1Q8TBN0 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RAB3IL1Q8TBN0 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
RAB3IL1Q8TBN0 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RAB3IL1Q8TBN0 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.35■□□□□ 0.69
RAB3IL1Q8TBN0 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RAB3IL1Q8TBN0 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RAB3IL1Q8TBN0 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RAB3IL1Q8TBN0 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RAB3IL1Q8TBN0 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
RAB3IL1Q8TBN0 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
RAB3IL1Q8TBN0 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC19.35■□□□□ 0.69
RAB3IL1Q8TBN0 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RAB3IL1Q8TBN0 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RAB3IL1Q8TBN0 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
RAB3IL1Q8TBN0 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.34■□□□□ 0.69
RAB3IL1Q8TBN0 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RAB3IL1Q8TBN0 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms