Protein–RNA interactions for Protein: Q8IYE0

CCDC146, Coiled-coil domain-containing protein 146, humanhuman

Predictions only

Length 955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC146Q8IYE0 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC25.82■■□□□ 1.72
CCDC146Q8IYE0 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC25.82■■□□□ 1.72
CCDC146Q8IYE0 UBE2SP1-201ENST00000450587 669 ntBASIC25.82■■□□□ 1.72
CCDC146Q8IYE0 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
CCDC146Q8IYE0 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC25.82■■□□□ 1.72
CCDC146Q8IYE0 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC25.82■■□□□ 1.72
CCDC146Q8IYE0 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
CCDC146Q8IYE0 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC25.82■■□□□ 1.72
CCDC146Q8IYE0 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC25.82■■□□□ 1.72
CCDC146Q8IYE0 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC25.82■■□□□ 1.72
CCDC146Q8IYE0 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC25.82■■□□□ 1.72
CCDC146Q8IYE0 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
CCDC146Q8IYE0 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC25.82■■□□□ 1.72
CCDC146Q8IYE0 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
CCDC146Q8IYE0 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
CCDC146Q8IYE0 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
CCDC146Q8IYE0 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
CCDC146Q8IYE0 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
CCDC146Q8IYE0 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC25.81■■□□□ 1.72
CCDC146Q8IYE0 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC25.81■■□□□ 1.72
CCDC146Q8IYE0 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC25.81■■□□□ 1.72
CCDC146Q8IYE0 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC25.81■■□□□ 1.72
CCDC146Q8IYE0 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC25.81■■□□□ 1.72
CCDC146Q8IYE0 DET1-205ENST00000558413 583 ntTSL 4 BASIC25.81■■□□□ 1.72
CCDC146Q8IYE0 Z99916.2-201ENST00000604037 246 ntBASIC25.81■■□□□ 1.72
CCDC146Q8IYE0 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC25.81■■□□□ 1.72
CCDC146Q8IYE0 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
CCDC146Q8IYE0 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC25.81■■□□□ 1.72
CCDC146Q8IYE0 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC25.81■■□□□ 1.72
CCDC146Q8IYE0 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC25.8■■□□□ 1.72
CCDC146Q8IYE0 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
CCDC146Q8IYE0 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
CCDC146Q8IYE0 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC25.8■■□□□ 1.72
CCDC146Q8IYE0 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
CCDC146Q8IYE0 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
CCDC146Q8IYE0 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC25.8■■□□□ 1.72
CCDC146Q8IYE0 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC25.8■■□□□ 1.72
CCDC146Q8IYE0 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
CCDC146Q8IYE0 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC25.8■■□□□ 1.72
CCDC146Q8IYE0 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC25.8■■□□□ 1.72
CCDC146Q8IYE0 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC25.8■■□□□ 1.72
CCDC146Q8IYE0 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC25.8■■□□□ 1.72
CCDC146Q8IYE0 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC25.8■■□□□ 1.72
CCDC146Q8IYE0 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC25.8■■□□□ 1.72
CCDC146Q8IYE0 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC25.8■■□□□ 1.72
CCDC146Q8IYE0 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC25.8■■□□□ 1.72
CCDC146Q8IYE0 AC116562.4-201ENST00000641316 2276 ntBASIC25.8■■□□□ 1.72
CCDC146Q8IYE0 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
CCDC146Q8IYE0 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
CCDC146Q8IYE0 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC25.79■■□□□ 1.72
CCDC146Q8IYE0 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
CCDC146Q8IYE0 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC25.79■■□□□ 1.72
CCDC146Q8IYE0 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
CCDC146Q8IYE0 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC25.79■■□□□ 1.72
CCDC146Q8IYE0 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC25.79■■□□□ 1.72
CCDC146Q8IYE0 FDX2-207ENST00000494368 584 ntTSL 4 BASIC25.79■■□□□ 1.72
CCDC146Q8IYE0 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC25.79■■□□□ 1.72
CCDC146Q8IYE0 HLA-A-209ENST00000638375 975 ntBASIC25.79■■□□□ 1.72
CCDC146Q8IYE0 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC25.79■■□□□ 1.72
CCDC146Q8IYE0 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
CCDC146Q8IYE0 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC25.79■■□□□ 1.72
CCDC146Q8IYE0 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
CCDC146Q8IYE0 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
CCDC146Q8IYE0 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC25.78■■□□□ 1.72
CCDC146Q8IYE0 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
CCDC146Q8IYE0 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC25.78■■□□□ 1.72
CCDC146Q8IYE0 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
CCDC146Q8IYE0 AC093484.2-201ENST00000580996 2166 ntBASIC25.78■■□□□ 1.72
CCDC146Q8IYE0 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC25.78■■□□□ 1.72
CCDC146Q8IYE0 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC25.78■■□□□ 1.72
CCDC146Q8IYE0 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC25.78■■□□□ 1.72
CCDC146Q8IYE0 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC25.78■■□□□ 1.72
CCDC146Q8IYE0 RPS2P4-201ENST00000476944 856 ntBASIC25.78■■□□□ 1.72
CCDC146Q8IYE0 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
CCDC146Q8IYE0 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC25.78■■□□□ 1.72
CCDC146Q8IYE0 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC25.78■■□□□ 1.72
CCDC146Q8IYE0 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC25.78■■□□□ 1.72
CCDC146Q8IYE0 AC066615.1-201ENST00000640911 628 ntBASIC25.78■■□□□ 1.72
CCDC146Q8IYE0 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
CCDC146Q8IYE0 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC25.78■■□□□ 1.72
CCDC146Q8IYE0 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC25.78■■□□□ 1.72
CCDC146Q8IYE0 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC25.78■■□□□ 1.72
CCDC146Q8IYE0 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
CCDC146Q8IYE0 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC25.78■■□□□ 1.72
CCDC146Q8IYE0 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
CCDC146Q8IYE0 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
CCDC146Q8IYE0 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
CCDC146Q8IYE0 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
CCDC146Q8IYE0 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
CCDC146Q8IYE0 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
CCDC146Q8IYE0 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC25.77■■□□□ 1.72
CCDC146Q8IYE0 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
CCDC146Q8IYE0 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
CCDC146Q8IYE0 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
CCDC146Q8IYE0 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
CCDC146Q8IYE0 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
CCDC146Q8IYE0 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC25.77■■□□□ 1.72
CCDC146Q8IYE0 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
CCDC146Q8IYE0 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
CCDC146Q8IYE0 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC25.77■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms