Protein–RNA interactions for Protein: Q6ZST4

LCNL1, Lipocalin-like 1 protein, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCNL1Q6ZST4 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LCNL1Q6ZST4 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
LCNL1Q6ZST4 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LCNL1Q6ZST4 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
LCNL1Q6ZST4 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC15.32■□□□□ 0.04
LCNL1Q6ZST4 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
LCNL1Q6ZST4 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LCNL1Q6ZST4 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC15.32■□□□□ 0.04
LCNL1Q6ZST4 GOLGA6L3-201ENST00000507199 1679 ntBASIC15.32■□□□□ 0.04
LCNL1Q6ZST4 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
LCNL1Q6ZST4 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
LCNL1Q6ZST4 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
LCNL1Q6ZST4 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC15.31■□□□□ 0.04
LCNL1Q6ZST4 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LCNL1Q6ZST4 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC15.31■□□□□ 0.04
LCNL1Q6ZST4 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC15.31■□□□□ 0.04
LCNL1Q6ZST4 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC15.31■□□□□ 0.04
LCNL1Q6ZST4 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC15.31■□□□□ 0.04
LCNL1Q6ZST4 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
LCNL1Q6ZST4 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LCNL1Q6ZST4 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC15.31■□□□□ 0.04
LCNL1Q6ZST4 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
LCNL1Q6ZST4 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LCNL1Q6ZST4 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LCNL1Q6ZST4 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC15.31■□□□□ 0.04
LCNL1Q6ZST4 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LCNL1Q6ZST4 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LCNL1Q6ZST4 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LCNL1Q6ZST4 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LCNL1Q6ZST4 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LCNL1Q6ZST4 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
LCNL1Q6ZST4 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LCNL1Q6ZST4 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LCNL1Q6ZST4 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LCNL1Q6ZST4 AC233702.5-201ENST00000584107 538 ntBASIC15.31■□□□□ 0.04
LCNL1Q6ZST4 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
LCNL1Q6ZST4 AP001412.1-201ENST00000608405 714 ntBASIC15.31■□□□□ 0.04
LCNL1Q6ZST4 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC15.31■□□□□ 0.04
LCNL1Q6ZST4 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC15.31■□□□□ 0.04
LCNL1Q6ZST4 AL049637.2-201ENST00000641778 930 ntBASIC15.31■□□□□ 0.04
LCNL1Q6ZST4 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
LCNL1Q6ZST4 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LCNL1Q6ZST4 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LCNL1Q6ZST4 AL135905.2-201ENST00000584934 1404 ntBASIC15.31■□□□□ 0.04
LCNL1Q6ZST4 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC15.31■□□□□ 0.04
LCNL1Q6ZST4 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
LCNL1Q6ZST4 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
LCNL1Q6ZST4 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC15.31■□□□□ 0.04
LCNL1Q6ZST4 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LCNL1Q6ZST4 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
LCNL1Q6ZST4 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC15.31■□□□□ 0.04
LCNL1Q6ZST4 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC15.31■□□□□ 0.04
LCNL1Q6ZST4 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LCNL1Q6ZST4 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
LCNL1Q6ZST4 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
LCNL1Q6ZST4 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LCNL1Q6ZST4 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
LCNL1Q6ZST4 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LCNL1Q6ZST4 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC15.31■□□□□ 0.04
LCNL1Q6ZST4 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LCNL1Q6ZST4 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC15.31■□□□□ 0.04
LCNL1Q6ZST4 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LCNL1Q6ZST4 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LCNL1Q6ZST4 ME2-218ENST00000640965 2476 ntTSL 5 BASIC15.31■□□□□ 0.04
LCNL1Q6ZST4 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LCNL1Q6ZST4 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC15.3■□□□□ 0.04
LCNL1Q6ZST4 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC15.3■□□□□ 0.04
LCNL1Q6ZST4 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LCNL1Q6ZST4 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LCNL1Q6ZST4 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LCNL1Q6ZST4 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LCNL1Q6ZST4 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LCNL1Q6ZST4 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC15.3■□□□□ 0.04
LCNL1Q6ZST4 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
LCNL1Q6ZST4 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LCNL1Q6ZST4 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
LCNL1Q6ZST4 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LCNL1Q6ZST4 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LCNL1Q6ZST4 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC15.3■□□□□ 0.04
LCNL1Q6ZST4 AC012618.2-201ENST00000428058 849 ntBASIC15.3■□□□□ 0.04
LCNL1Q6ZST4 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LCNL1Q6ZST4 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC15.3■□□□□ 0.04
LCNL1Q6ZST4 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LCNL1Q6ZST4 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC15.3■□□□□ 0.04
LCNL1Q6ZST4 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC15.3■□□□□ 0.04
LCNL1Q6ZST4 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC15.3■□□□□ 0.04
LCNL1Q6ZST4 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LCNL1Q6ZST4 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
LCNL1Q6ZST4 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC15.3■□□□□ 0.04
LCNL1Q6ZST4 GOLGA2P11-201ENST00000562660 1621 ntBASIC15.3■□□□□ 0.04
LCNL1Q6ZST4 RARRES2P10-201ENST00000564312 460 ntBASIC15.3■□□□□ 0.04
LCNL1Q6ZST4 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC15.3■□□□□ 0.04
LCNL1Q6ZST4 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LCNL1Q6ZST4 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC15.3■□□□□ 0.04
LCNL1Q6ZST4 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC15.3■□□□□ 0.04
LCNL1Q6ZST4 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC15.3■□□□□ 0.04
LCNL1Q6ZST4 LBX2-AS1-202ENST00000603175 2083 ntBASIC15.3■□□□□ 0.04
LCNL1Q6ZST4 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LCNL1Q6ZST4 AC113410.3-201ENST00000623366 203 ntBASIC15.3■□□□□ 0.04
LCNL1Q6ZST4 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms