Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HLA-DQA1P01909 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC14.63□□□□□ -0.07
HLA-DQA1P01909 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
HLA-DQA1P01909 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC14.63□□□□□ -0.07
HLA-DQA1P01909 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC14.63□□□□□ -0.07
HLA-DQA1P01909 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
HLA-DQA1P01909 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HLA-DQA1P01909 PXK-203ENST00000383715 1756 ntTSL 5 BASIC14.63□□□□□ -0.07
HLA-DQA1P01909 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HLA-DQA1P01909 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
HLA-DQA1P01909 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC14.63□□□□□ -0.07
HLA-DQA1P01909 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC14.63□□□□□ -0.07
HLA-DQA1P01909 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HLA-DQA1P01909 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HLA-DQA1P01909 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HLA-DQA1P01909 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
HLA-DQA1P01909 PTMA-205ENST00000410064 814 ntTSL 2 BASIC14.63□□□□□ -0.07
HLA-DQA1P01909 AC096631.2-201ENST00000436136 790 ntBASIC14.63□□□□□ -0.07
HLA-DQA1P01909 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC14.63□□□□□ -0.07
HLA-DQA1P01909 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
HLA-DQA1P01909 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
HLA-DQA1P01909 AL138724.1-201ENST00000606771 1088 ntBASIC14.63□□□□□ -0.07
HLA-DQA1P01909 SF1-220ENST00000626028 704 ntTSL 2 BASIC14.63□□□□□ -0.07
HLA-DQA1P01909 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC14.63□□□□□ -0.07
HLA-DQA1P01909 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
HLA-DQA1P01909 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC14.63□□□□□ -0.07
HLA-DQA1P01909 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC14.63□□□□□ -0.07
HLA-DQA1P01909 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
HLA-DQA1P01909 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
HLA-DQA1P01909 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
HLA-DQA1P01909 AL031598.1-201ENST00000561511 1773 ntBASIC14.62□□□□□ -0.07
HLA-DQA1P01909 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
HLA-DQA1P01909 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HLA-DQA1P01909 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
HLA-DQA1P01909 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
HLA-DQA1P01909 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC14.62□□□□□ -0.07
HLA-DQA1P01909 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HLA-DQA1P01909 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC14.62□□□□□ -0.07
HLA-DQA1P01909 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC14.62□□□□□ -0.07
HLA-DQA1P01909 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HLA-DQA1P01909 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
HLA-DQA1P01909 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC14.62□□□□□ -0.07
HLA-DQA1P01909 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HLA-DQA1P01909 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HLA-DQA1P01909 UNC93B3-201ENST00000308076 687 ntBASIC14.62□□□□□ -0.07
HLA-DQA1P01909 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HLA-DQA1P01909 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
HLA-DQA1P01909 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
HLA-DQA1P01909 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
HLA-DQA1P01909 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
HLA-DQA1P01909 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC14.62□□□□□ -0.07
HLA-DQA1P01909 SMUG1P1-201ENST00000590640 811 ntBASIC14.62□□□□□ -0.07
HLA-DQA1P01909 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC14.62□□□□□ -0.07
HLA-DQA1P01909 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC14.62□□□□□ -0.07
HLA-DQA1P01909 AL136162.1-201ENST00000607711 1078 ntBASIC14.62□□□□□ -0.07
HLA-DQA1P01909 AC011298.3-201ENST00000615796 283 ntBASIC14.62□□□□□ -0.07
HLA-DQA1P01909 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
HLA-DQA1P01909 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
HLA-DQA1P01909 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
HLA-DQA1P01909 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
HLA-DQA1P01909 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC14.62□□□□□ -0.07
HLA-DQA1P01909 ASL-203ENST00000380839 1765 ntTSL 5 BASIC14.62□□□□□ -0.07
HLA-DQA1P01909 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
HLA-DQA1P01909 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
HLA-DQA1P01909 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC14.62□□□□□ -0.07
HLA-DQA1P01909 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HLA-DQA1P01909 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HLA-DQA1P01909 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
HLA-DQA1P01909 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
HLA-DQA1P01909 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
HLA-DQA1P01909 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
HLA-DQA1P01909 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
HLA-DQA1P01909 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
HLA-DQA1P01909 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
HLA-DQA1P01909 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HLA-DQA1P01909 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC14.61□□□□□ -0.07
HLA-DQA1P01909 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
HLA-DQA1P01909 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
HLA-DQA1P01909 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HLA-DQA1P01909 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC14.61□□□□□ -0.07
HLA-DQA1P01909 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
HLA-DQA1P01909 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HLA-DQA1P01909 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
HLA-DQA1P01909 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
HLA-DQA1P01909 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC14.61□□□□□ -0.07
HLA-DQA1P01909 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HLA-DQA1P01909 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC14.61□□□□□ -0.07
HLA-DQA1P01909 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
HLA-DQA1P01909 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC14.61□□□□□ -0.07
HLA-DQA1P01909 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HLA-DQA1P01909 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
HLA-DQA1P01909 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HLA-DQA1P01909 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
HLA-DQA1P01909 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC14.61□□□□□ -0.07
HLA-DQA1P01909 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
HLA-DQA1P01909 AC135279.3-201ENST00000610945 1311 ntBASIC14.61□□□□□ -0.07
HLA-DQA1P01909 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
HLA-DQA1P01909 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HLA-DQA1P01909 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
HLA-DQA1P01909 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms