Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RAB40CQ96S21 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC15.81■□□□□ 0.12
RAB40CQ96S21 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
RAB40CQ96S21 LGR4-203ENST00000480977 492 ntTSL 2 BASIC15.81■□□□□ 0.12
RAB40CQ96S21 CASP6-205ENST00000505486 538 ntTSL 4 BASIC15.81■□□□□ 0.12
RAB40CQ96S21 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
RAB40CQ96S21 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC15.81■□□□□ 0.12
RAB40CQ96S21 AL161938.1-201ENST00000569833 2180 ntBASIC15.81■□□□□ 0.12
RAB40CQ96S21 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
RAB40CQ96S21 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC15.81■□□□□ 0.12
RAB40CQ96S21 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC15.81■□□□□ 0.12
RAB40CQ96S21 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RAB40CQ96S21 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
RAB40CQ96S21 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
RAB40CQ96S21 AC007613.1-201ENST00000572811 2597 ntBASIC15.81■□□□□ 0.12
RAB40CQ96S21 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC15.8■□□□□ 0.12
RAB40CQ96S21 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
RAB40CQ96S21 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAB40CQ96S21 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAB40CQ96S21 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
RAB40CQ96S21 PHGDH-210ENST00000641115 1638 ntBASIC15.8■□□□□ 0.12
RAB40CQ96S21 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
RAB40CQ96S21 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAB40CQ96S21 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RAB40CQ96S21 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RAB40CQ96S21 LINC02228-203ENST00000641970 1355 ntBASIC15.8■□□□□ 0.12
RAB40CQ96S21 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAB40CQ96S21 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAB40CQ96S21 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAB40CQ96S21 HLA-G-202ENST00000376815 851 ntBASIC15.8■□□□□ 0.12
RAB40CQ96S21 HLA-G-203ENST00000376818 1127 ntBASIC15.8■□□□□ 0.12
RAB40CQ96S21 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAB40CQ96S21 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
RAB40CQ96S21 TESC-206ENST00000541210 936 ntTSL 3 BASIC15.8■□□□□ 0.12
RAB40CQ96S21 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC15.8■□□□□ 0.12
RAB40CQ96S21 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC15.8■□□□□ 0.12
RAB40CQ96S21 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC15.8■□□□□ 0.12
RAB40CQ96S21 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAB40CQ96S21 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
RAB40CQ96S21 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAB40CQ96S21 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC15.8■□□□□ 0.12
RAB40CQ96S21 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
RAB40CQ96S21 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAB40CQ96S21 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RAB40CQ96S21 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
RAB40CQ96S21 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAB40CQ96S21 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAB40CQ96S21 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
RAB40CQ96S21 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC15.8■□□□□ 0.12
RAB40CQ96S21 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RAB40CQ96S21 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAB40CQ96S21 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RAB40CQ96S21 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC15.79■□□□□ 0.12
RAB40CQ96S21 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RAB40CQ96S21 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAB40CQ96S21 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC15.79■□□□□ 0.12
RAB40CQ96S21 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAB40CQ96S21 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAB40CQ96S21 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC15.79■□□□□ 0.12
RAB40CQ96S21 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RAB40CQ96S21 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAB40CQ96S21 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
RAB40CQ96S21 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
RAB40CQ96S21 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC15.79■□□□□ 0.12
RAB40CQ96S21 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC15.79■□□□□ 0.12
RAB40CQ96S21 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC15.79■□□□□ 0.12
RAB40CQ96S21 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC15.79■□□□□ 0.12
RAB40CQ96S21 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC15.79■□□□□ 0.12
RAB40CQ96S21 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAB40CQ96S21 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAB40CQ96S21 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAB40CQ96S21 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAB40CQ96S21 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC15.79■□□□□ 0.12
RAB40CQ96S21 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC15.79■□□□□ 0.12
RAB40CQ96S21 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAB40CQ96S21 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAB40CQ96S21 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAB40CQ96S21 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAB40CQ96S21 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC15.79■□□□□ 0.12
RAB40CQ96S21 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RAB40CQ96S21 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAB40CQ96S21 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAB40CQ96S21 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAB40CQ96S21 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAB40CQ96S21 AC006333.2-201ENST00000607957 2099 ntBASIC15.79■□□□□ 0.12
RAB40CQ96S21 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
RAB40CQ96S21 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
RAB40CQ96S21 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC15.78■□□□□ 0.12
RAB40CQ96S21 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RAB40CQ96S21 AR-207ENST00000612010 3896 ntTSL 5 BASIC15.78■□□□□ 0.12
RAB40CQ96S21 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
RAB40CQ96S21 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
RAB40CQ96S21 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC15.78■□□□□ 0.12
RAB40CQ96S21 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC15.78■□□□□ 0.12
RAB40CQ96S21 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RAB40CQ96S21 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC15.78■□□□□ 0.12
RAB40CQ96S21 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC15.78■□□□□ 0.12
RAB40CQ96S21 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
RAB40CQ96S21 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC15.78■□□□□ 0.12
RAB40CQ96S21 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms