Protein–RNA interactions for Protein: Q96PU9

ODF3, Outer dense fiber protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ODF3Q96PU9 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ODF3Q96PU9 TREX2-204ENST00000370212 861 ntTSL 5 BASIC14.41□□□□□ -0.1
ODF3Q96PU9 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
ODF3Q96PU9 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
ODF3Q96PU9 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC14.41□□□□□ -0.1
ODF3Q96PU9 GATS-209ENST00000454084 1030 ntTSL 3 BASIC14.41□□□□□ -0.1
ODF3Q96PU9 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC14.41□□□□□ -0.1
ODF3Q96PU9 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC14.41□□□□□ -0.1
ODF3Q96PU9 REXO2-208ENST00000539754 791 ntTSL 2 BASIC14.41□□□□□ -0.1
ODF3Q96PU9 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC14.41□□□□□ -0.1
ODF3Q96PU9 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC14.41□□□□□ -0.1
ODF3Q96PU9 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC14.41□□□□□ -0.1
ODF3Q96PU9 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC14.41□□□□□ -0.1
ODF3Q96PU9 AC006557.6-201ENST00000623071 864 ntBASIC14.41□□□□□ -0.1
ODF3Q96PU9 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ODF3Q96PU9 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
ODF3Q96PU9 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
ODF3Q96PU9 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ODF3Q96PU9 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
ODF3Q96PU9 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
ODF3Q96PU9 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
ODF3Q96PU9 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
ODF3Q96PU9 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
ODF3Q96PU9 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
ODF3Q96PU9 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC14.41□□□□□ -0.1
ODF3Q96PU9 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
ODF3Q96PU9 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
ODF3Q96PU9 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
ODF3Q96PU9 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC14.41□□□□□ -0.1
ODF3Q96PU9 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ODF3Q96PU9 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC14.41□□□□□ -0.1
ODF3Q96PU9 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ODF3Q96PU9 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ODF3Q96PU9 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
ODF3Q96PU9 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
ODF3Q96PU9 GOLGA6L3-201ENST00000507199 1679 ntBASIC14.4□□□□□ -0.1
ODF3Q96PU9 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
ODF3Q96PU9 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ODF3Q96PU9 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
ODF3Q96PU9 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
ODF3Q96PU9 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ODF3Q96PU9 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC14.4□□□□□ -0.1
ODF3Q96PU9 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ODF3Q96PU9 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC14.4□□□□□ -0.1
ODF3Q96PU9 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC14.4□□□□□ -0.1
ODF3Q96PU9 PNMA6B-201ENST00000538162 1200 ntBASIC14.4□□□□□ -0.1
ODF3Q96PU9 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC14.4□□□□□ -0.1
ODF3Q96PU9 AL138781.1-201ENST00000566567 1274 ntBASIC14.4□□□□□ -0.1
ODF3Q96PU9 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC14.4□□□□□ -0.1
ODF3Q96PU9 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC14.4□□□□□ -0.1
ODF3Q96PU9 AL121829.2-201ENST00000620908 328 ntBASIC14.4□□□□□ -0.1
ODF3Q96PU9 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ODF3Q96PU9 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
ODF3Q96PU9 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ODF3Q96PU9 KRT8P8-201ENST00000434750 1448 ntBASIC14.4□□□□□ -0.1
ODF3Q96PU9 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
ODF3Q96PU9 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
ODF3Q96PU9 PTGES2-AS1-201ENST00000443493 2100 ntBASIC14.39□□□□□ -0.11
ODF3Q96PU9 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ODF3Q96PU9 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ODF3Q96PU9 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ODF3Q96PU9 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ODF3Q96PU9 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ODF3Q96PU9 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC14.39□□□□□ -0.11
ODF3Q96PU9 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ODF3Q96PU9 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
ODF3Q96PU9 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
ODF3Q96PU9 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
ODF3Q96PU9 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ODF3Q96PU9 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
ODF3Q96PU9 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC14.39□□□□□ -0.11
ODF3Q96PU9 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC14.39□□□□□ -0.11
ODF3Q96PU9 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC14.39□□□□□ -0.11
ODF3Q96PU9 OR2A1-AS1-207ENST00000486094 819 ntBASIC14.39□□□□□ -0.11
ODF3Q96PU9 TK2-208ENST00000545043 1120 ntTSL 2 BASIC14.39□□□□□ -0.11
ODF3Q96PU9 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC14.39□□□□□ -0.11
ODF3Q96PU9 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC14.39□□□□□ -0.11
ODF3Q96PU9 WT1-AS_3.1-201ENST00000613262 234 ntBASIC14.39□□□□□ -0.11
ODF3Q96PU9 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
ODF3Q96PU9 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
ODF3Q96PU9 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
ODF3Q96PU9 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ODF3Q96PU9 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
ODF3Q96PU9 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ODF3Q96PU9 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ODF3Q96PU9 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
ODF3Q96PU9 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
ODF3Q96PU9 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
ODF3Q96PU9 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
ODF3Q96PU9 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ODF3Q96PU9 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
ODF3Q96PU9 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ODF3Q96PU9 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ODF3Q96PU9 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
ODF3Q96PU9 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
ODF3Q96PU9 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC14.38□□□□□ -0.11
ODF3Q96PU9 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC14.38□□□□□ -0.11
ODF3Q96PU9 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC14.38□□□□□ -0.11
ODF3Q96PU9 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC14.38□□□□□ -0.11
ODF3Q96PU9 SLC29A4P2-201ENST00000504749 1089 ntBASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms