Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SNX3O60493 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
SNX3O60493 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SNX3O60493 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SNX3O60493 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
SNX3O60493 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SNX3O60493 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC19.22■□□□□ 0.67
SNX3O60493 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC19.22■□□□□ 0.67
SNX3O60493 GUSBP5-201ENST00000418136 578 ntBASIC19.22■□□□□ 0.67
SNX3O60493 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC19.22■□□□□ 0.67
SNX3O60493 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC19.22■□□□□ 0.67
SNX3O60493 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SNX3O60493 AL031963.3-201ENST00000606441 850 ntBASIC19.22■□□□□ 0.67
SNX3O60493 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
SNX3O60493 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SNX3O60493 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.22■□□□□ 0.67
SNX3O60493 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SNX3O60493 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.22■□□□□ 0.67
SNX3O60493 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SNX3O60493 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.22■□□□□ 0.67
SNX3O60493 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.21■□□□□ 0.67
SNX3O60493 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SNX3O60493 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SNX3O60493 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
SNX3O60493 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SNX3O60493 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SNX3O60493 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SNX3O60493 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
SNX3O60493 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC19.21■□□□□ 0.67
SNX3O60493 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC19.21■□□□□ 0.67
SNX3O60493 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SNX3O60493 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
SNX3O60493 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
SNX3O60493 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
SNX3O60493 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.21■□□□□ 0.67
SNX3O60493 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.21■□□□□ 0.67
SNX3O60493 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SNX3O60493 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC19.21■□□□□ 0.67
SNX3O60493 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.21■□□□□ 0.67
SNX3O60493 AC008764.7-201ENST00000593779 1081 ntBASIC19.21■□□□□ 0.67
SNX3O60493 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC19.21■□□□□ 0.67
SNX3O60493 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SNX3O60493 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC19.21■□□□□ 0.67
SNX3O60493 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SNX3O60493 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SNX3O60493 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC19.21■□□□□ 0.67
SNX3O60493 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SNX3O60493 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SNX3O60493 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC19.2■□□□□ 0.66
SNX3O60493 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SNX3O60493 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
SNX3O60493 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SNX3O60493 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SNX3O60493 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
SNX3O60493 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SNX3O60493 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SNX3O60493 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
SNX3O60493 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC19.2■□□□□ 0.66
SNX3O60493 AC099791.1-201ENST00000416440 715 ntBASIC19.2■□□□□ 0.66
SNX3O60493 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC19.2■□□□□ 0.66
SNX3O60493 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SNX3O60493 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC19.2■□□□□ 0.66
SNX3O60493 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.2■□□□□ 0.66
SNX3O60493 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC19.2■□□□□ 0.66
SNX3O60493 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC19.2■□□□□ 0.66
SNX3O60493 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
SNX3O60493 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.2■□□□□ 0.66
SNX3O60493 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SNX3O60493 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC19.2■□□□□ 0.66
SNX3O60493 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
SNX3O60493 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.19■□□□□ 0.66
SNX3O60493 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SNX3O60493 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SNX3O60493 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SNX3O60493 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.19■□□□□ 0.66
SNX3O60493 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SNX3O60493 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
SNX3O60493 CD276-201ENST00000318424 2738 ntTSL 5 BASIC19.19■□□□□ 0.66
SNX3O60493 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC19.19■□□□□ 0.66
SNX3O60493 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
SNX3O60493 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SNX3O60493 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
SNX3O60493 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC19.19■□□□□ 0.66
SNX3O60493 AC097381.1-201ENST00000429019 1296 ntBASIC19.19■□□□□ 0.66
SNX3O60493 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC19.19■□□□□ 0.66
SNX3O60493 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SNX3O60493 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.19■□□□□ 0.66
SNX3O60493 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SNX3O60493 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
SNX3O60493 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
SNX3O60493 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
SNX3O60493 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC19.19■□□□□ 0.66
SNX3O60493 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SNX3O60493 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SNX3O60493 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC19.19■□□□□ 0.66
SNX3O60493 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SNX3O60493 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SNX3O60493 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC19.19■□□□□ 0.66
SNX3O60493 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SNX3O60493 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms