Protein–RNA interactions for Protein: O00453

LST1, Leukocyte-specific transcript 1 protein, humanhuman

Predictions only

Length 97 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LST1O00453 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
LST1O00453 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
LST1O00453 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
LST1O00453 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LST1O00453 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
LST1O00453 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC12.69□□□□□ -0.38
LST1O00453 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
LST1O00453 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LST1O00453 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
LST1O00453 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LST1O00453 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC12.68□□□□□ -0.38
LST1O00453 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC12.68□□□□□ -0.38
LST1O00453 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LST1O00453 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
LST1O00453 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
LST1O00453 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LST1O00453 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LST1O00453 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LST1O00453 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LST1O00453 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LST1O00453 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
LST1O00453 AC008764.6-201ENST00000595909 2069 ntBASIC12.68□□□□□ -0.38
LST1O00453 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LST1O00453 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
LST1O00453 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
LST1O00453 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
LST1O00453 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
LST1O00453 ESPNP-201ENST00000270691 2015 ntBASIC12.68□□□□□ -0.38
LST1O00453 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC12.68□□□□□ -0.38
LST1O00453 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LST1O00453 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
LST1O00453 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
LST1O00453 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
LST1O00453 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
LST1O00453 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC12.68□□□□□ -0.38
LST1O00453 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
LST1O00453 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
LST1O00453 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LST1O00453 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LST1O00453 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
LST1O00453 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
LST1O00453 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC12.68□□□□□ -0.38
LST1O00453 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
LST1O00453 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
LST1O00453 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC12.68□□□□□ -0.38
LST1O00453 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LST1O00453 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
LST1O00453 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LST1O00453 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LST1O00453 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC12.67□□□□□ -0.38
LST1O00453 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC12.67□□□□□ -0.38
LST1O00453 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
LST1O00453 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LST1O00453 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
LST1O00453 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC12.67□□□□□ -0.38
LST1O00453 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC12.67□□□□□ -0.38
LST1O00453 TSPY13P-201ENST00000338964 914 ntBASIC12.67□□□□□ -0.38
LST1O00453 BEX3-202ENST00000372634 753 ntTSL 2 BASIC12.67□□□□□ -0.38
LST1O00453 AC004987.1-201ENST00000428627 508 ntBASIC12.67□□□□□ -0.38
LST1O00453 OR2I1P-207ENST00000453522 948 ntBASIC12.67□□□□□ -0.38
LST1O00453 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC12.67□□□□□ -0.38
LST1O00453 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
LST1O00453 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC12.67□□□□□ -0.38
LST1O00453 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC12.67□□□□□ -0.38
LST1O00453 BRD4-212ENST00000630599 726 ntTSL 2 BASIC12.67□□□□□ -0.38
LST1O00453 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
LST1O00453 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
LST1O00453 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC12.67□□□□□ -0.38
LST1O00453 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LST1O00453 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LST1O00453 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LST1O00453 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC12.67□□□□□ -0.38
LST1O00453 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
LST1O00453 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC12.67□□□□□ -0.38
LST1O00453 LINC00896-202ENST00000609602 2128 ntBASIC12.67□□□□□ -0.38
LST1O00453 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
LST1O00453 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LST1O00453 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LST1O00453 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC12.67□□□□□ -0.38
LST1O00453 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
LST1O00453 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC12.67□□□□□ -0.38
LST1O00453 AC011270.2-201ENST00000624293 2550 ntBASIC12.67□□□□□ -0.38
LST1O00453 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
LST1O00453 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LST1O00453 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC12.67□□□□□ -0.38
LST1O00453 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LST1O00453 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
LST1O00453 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC12.66□□□□□ -0.38
LST1O00453 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LST1O00453 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC12.66□□□□□ -0.38
LST1O00453 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
LST1O00453 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
LST1O00453 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
LST1O00453 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
LST1O00453 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LST1O00453 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
LST1O00453 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC12.66□□□□□ -0.38
LST1O00453 YBX1P4-201ENST00000392794 808 ntBASIC12.66□□□□□ -0.38
LST1O00453 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC12.66□□□□□ -0.38
LST1O00453 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC12.66□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms