Protein–RNA interactions for Protein: H3BVE0

BOLA2-SMG1P6, BOLA2-SMG1P6 readthrough (Fragment), humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BOLA2-SMG1P6H3BVE0 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 ABALON-201ENST00000629058 1903 ntBASIC17.07■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC17.07■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.07■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 BCL2-203ENST00000589955 5011 ntBASIC17.06■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC17.06■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17.06■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.06■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 DUX4L4-201ENST00000566884 1269 ntBASIC17.06■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC17.06■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC17.06■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 AC012317.2-201ENST00000623305 2251 ntBASIC17.06■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC17.06■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC17.06■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC17.06■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.06■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC17.05■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 NARF-205ENST00000412079 1760 ntTSL 5 BASIC17.05■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC17.05■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.05■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC17.05■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.05■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 GUK1-208ENST00000366728 842 ntTSL 2 BASIC17.05■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC17.05■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC17.05■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 LINC00554-201ENST00000564841 3011 ntBASIC17.05■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.05■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.05■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC17.05■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC17.05■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 AL031598.1-201ENST00000561511 1773 ntBASIC17.05■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 AC092850.2-201ENST00000623821 2697 ntBASIC17.04■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC17.04■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC17.04■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.04■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 IDNK-201ENST00000376417 511 ntTSL 5 BASIC17.04■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC17.04■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 AC010980.1-201ENST00000587192 1142 ntBASIC17.04■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC17.04■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms