Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
TCRBV3S1A0A5B6 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.29■□□□□ 0.52
TCRBV3S1A0A5B6 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
TCRBV3S1A0A5B6 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TCRBV3S1A0A5B6 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TCRBV3S1A0A5B6 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TCRBV3S1A0A5B6 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TCRBV3S1A0A5B6 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TCRBV3S1A0A5B6 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TCRBV3S1A0A5B6 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TCRBV3S1A0A5B6 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TCRBV3S1A0A5B6 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
TCRBV3S1A0A5B6 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TCRBV3S1A0A5B6 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TCRBV3S1A0A5B6 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TCRBV3S1A0A5B6 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TCRBV3S1A0A5B6 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
TCRBV3S1A0A5B6 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TCRBV3S1A0A5B6 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TCRBV3S1A0A5B6 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TCRBV3S1A0A5B6 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.28■□□□□ 0.52
TCRBV3S1A0A5B6 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.28■□□□□ 0.52
TCRBV3S1A0A5B6 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC18.28■□□□□ 0.52
TCRBV3S1A0A5B6 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC18.28■□□□□ 0.52
TCRBV3S1A0A5B6 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
TCRBV3S1A0A5B6 HLA-G-202ENST00000376815 851 ntBASIC18.28■□□□□ 0.52
TCRBV3S1A0A5B6 HLA-G-203ENST00000376818 1127 ntBASIC18.28■□□□□ 0.52
TCRBV3S1A0A5B6 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TCRBV3S1A0A5B6 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC18.28■□□□□ 0.52
TCRBV3S1A0A5B6 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC18.28■□□□□ 0.52
TCRBV3S1A0A5B6 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TCRBV3S1A0A5B6 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
TCRBV3S1A0A5B6 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC18.28■□□□□ 0.52
TCRBV3S1A0A5B6 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TCRBV3S1A0A5B6 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TCRBV3S1A0A5B6 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TCRBV3S1A0A5B6 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
TCRBV3S1A0A5B6 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
TCRBV3S1A0A5B6 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.27■□□□□ 0.52
TCRBV3S1A0A5B6 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TCRBV3S1A0A5B6 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TCRBV3S1A0A5B6 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.27■□□□□ 0.52
TCRBV3S1A0A5B6 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
TCRBV3S1A0A5B6 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.27■□□□□ 0.52
TCRBV3S1A0A5B6 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
TCRBV3S1A0A5B6 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
TCRBV3S1A0A5B6 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC18.27■□□□□ 0.52
TCRBV3S1A0A5B6 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.27■□□□□ 0.52
TCRBV3S1A0A5B6 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TCRBV3S1A0A5B6 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TCRBV3S1A0A5B6 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TCRBV3S1A0A5B6 AC027612.3-201ENST00000413684 1047 ntBASIC18.27■□□□□ 0.52
TCRBV3S1A0A5B6 TESC-206ENST00000541210 936 ntTSL 3 BASIC18.27■□□□□ 0.52
TCRBV3S1A0A5B6 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC18.27■□□□□ 0.52
TCRBV3S1A0A5B6 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC18.27■□□□□ 0.52
TCRBV3S1A0A5B6 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TCRBV3S1A0A5B6 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.27■□□□□ 0.51
TCRBV3S1A0A5B6 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.27■□□□□ 0.51
TCRBV3S1A0A5B6 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TCRBV3S1A0A5B6 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
TCRBV3S1A0A5B6 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TCRBV3S1A0A5B6 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.27■□□□□ 0.51
TCRBV3S1A0A5B6 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC18.27■□□□□ 0.51
TCRBV3S1A0A5B6 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TCRBV3S1A0A5B6 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.26■□□□□ 0.51
TCRBV3S1A0A5B6 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TCRBV3S1A0A5B6 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
TCRBV3S1A0A5B6 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TCRBV3S1A0A5B6 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
TCRBV3S1A0A5B6 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TCRBV3S1A0A5B6 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC18.26■□□□□ 0.51
TCRBV3S1A0A5B6 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
TCRBV3S1A0A5B6 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC18.26■□□□□ 0.51
TCRBV3S1A0A5B6 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TCRBV3S1A0A5B6 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TCRBV3S1A0A5B6 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TCRBV3S1A0A5B6 RHOF-204ENST00000537265 699 ntTSL 2 BASIC18.26■□□□□ 0.51
TCRBV3S1A0A5B6 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC18.26■□□□□ 0.51
TCRBV3S1A0A5B6 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TCRBV3S1A0A5B6 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
TCRBV3S1A0A5B6 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.26■□□□□ 0.51
TCRBV3S1A0A5B6 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TCRBV3S1A0A5B6 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC18.26■□□□□ 0.51
TCRBV3S1A0A5B6 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC18.26■□□□□ 0.51
TCRBV3S1A0A5B6 LINC02228-203ENST00000641970 1355 ntBASIC18.26■□□□□ 0.51
TCRBV3S1A0A5B6 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
TCRBV3S1A0A5B6 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TCRBV3S1A0A5B6 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TCRBV3S1A0A5B6 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
TCRBV3S1A0A5B6 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TCRBV3S1A0A5B6 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TCRBV3S1A0A5B6 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.26■□□□□ 0.51
TCRBV3S1A0A5B6 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
TCRBV3S1A0A5B6 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.26■□□□□ 0.51
TCRBV3S1A0A5B6 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TCRBV3S1A0A5B6 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.26■□□□□ 0.51
TCRBV3S1A0A5B6 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TCRBV3S1A0A5B6 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TCRBV3S1A0A5B6 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
TCRBV3S1A0A5B6 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms