Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
RNF103-CHMP3A0A140T963 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
RNF103-CHMP3A0A140T963 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF103-CHMP3A0A140T963 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF103-CHMP3A0A140T963 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF103-CHMP3A0A140T963 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF103-CHMP3A0A140T963 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
RNF103-CHMP3A0A140T963 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC18.78■□□□□ 0.6
RNF103-CHMP3A0A140T963 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.78■□□□□ 0.6
RNF103-CHMP3A0A140T963 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RNF103-CHMP3A0A140T963 TREX1-205ENST00000625293 1783 ntBASIC18.78■□□□□ 0.6
RNF103-CHMP3A0A140T963 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18.78■□□□□ 0.6
RNF103-CHMP3A0A140T963 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF103-CHMP3A0A140T963 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF103-CHMP3A0A140T963 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
RNF103-CHMP3A0A140T963 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RNF103-CHMP3A0A140T963 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RNF103-CHMP3A0A140T963 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RNF103-CHMP3A0A140T963 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RNF103-CHMP3A0A140T963 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.77■□□□□ 0.6
RNF103-CHMP3A0A140T963 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RNF103-CHMP3A0A140T963 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
RNF103-CHMP3A0A140T963 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC18.77■□□□□ 0.6
RNF103-CHMP3A0A140T963 AL355472.2-201ENST00000422958 438 ntBASIC18.77■□□□□ 0.6
RNF103-CHMP3A0A140T963 MAZ-216ENST00000616501 991 ntTSL 5 BASIC18.77■□□□□ 0.6
RNF103-CHMP3A0A140T963 MDK-213ENST00000617138 635 ntTSL 2 BASIC18.77■□□□□ 0.6
RNF103-CHMP3A0A140T963 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC18.77■□□□□ 0.6
RNF103-CHMP3A0A140T963 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC18.77■□□□□ 0.6
RNF103-CHMP3A0A140T963 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.77■□□□□ 0.6
RNF103-CHMP3A0A140T963 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.59
RNF103-CHMP3A0A140T963 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
RNF103-CHMP3A0A140T963 HTR7P1-202ENST00000624664 4411 ntBASIC18.77■□□□□ 0.59
RNF103-CHMP3A0A140T963 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
RNF103-CHMP3A0A140T963 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
RNF103-CHMP3A0A140T963 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
RNF103-CHMP3A0A140T963 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RNF103-CHMP3A0A140T963 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNF103-CHMP3A0A140T963 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNF103-CHMP3A0A140T963 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNF103-CHMP3A0A140T963 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.76■□□□□ 0.59
RNF103-CHMP3A0A140T963 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RNF103-CHMP3A0A140T963 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNF103-CHMP3A0A140T963 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNF103-CHMP3A0A140T963 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNF103-CHMP3A0A140T963 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.76■□□□□ 0.59
RNF103-CHMP3A0A140T963 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNF103-CHMP3A0A140T963 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNF103-CHMP3A0A140T963 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RNF103-CHMP3A0A140T963 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNF103-CHMP3A0A140T963 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNF103-CHMP3A0A140T963 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNF103-CHMP3A0A140T963 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RNF103-CHMP3A0A140T963 AL031963.3-201ENST00000606441 850 ntBASIC18.76■□□□□ 0.59
RNF103-CHMP3A0A140T963 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
RNF103-CHMP3A0A140T963 PARP1-210ENST00000629232 477 ntTSL 5 BASIC18.76■□□□□ 0.59
RNF103-CHMP3A0A140T963 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.76■□□□□ 0.59
RNF103-CHMP3A0A140T963 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC18.76■□□□□ 0.59
RNF103-CHMP3A0A140T963 LETM1P2-201ENST00000597330 2178 ntBASIC18.76■□□□□ 0.59
RNF103-CHMP3A0A140T963 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNF103-CHMP3A0A140T963 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNF103-CHMP3A0A140T963 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
RNF103-CHMP3A0A140T963 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC18.76■□□□□ 0.59
RNF103-CHMP3A0A140T963 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.76■□□□□ 0.59
RNF103-CHMP3A0A140T963 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.76■□□□□ 0.59
RNF103-CHMP3A0A140T963 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RNF103-CHMP3A0A140T963 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF103-CHMP3A0A140T963 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC18.75■□□□□ 0.59
RNF103-CHMP3A0A140T963 KRT8P17-201ENST00000453110 1448 ntBASIC18.75■□□□□ 0.59
RNF103-CHMP3A0A140T963 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.75■□□□□ 0.59
RNF103-CHMP3A0A140T963 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF103-CHMP3A0A140T963 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF103-CHMP3A0A140T963 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RNF103-CHMP3A0A140T963 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.75■□□□□ 0.59
RNF103-CHMP3A0A140T963 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
RNF103-CHMP3A0A140T963 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC18.75■□□□□ 0.59
RNF103-CHMP3A0A140T963 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RNF103-CHMP3A0A140T963 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC18.75■□□□□ 0.59
RNF103-CHMP3A0A140T963 OR10C1-204ENST00000622521 1039 ntBASIC18.75■□□□□ 0.59
RNF103-CHMP3A0A140T963 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
RNF103-CHMP3A0A140T963 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF103-CHMP3A0A140T963 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
RNF103-CHMP3A0A140T963 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
RNF103-CHMP3A0A140T963 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC18.74■□□□□ 0.59
RNF103-CHMP3A0A140T963 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
RNF103-CHMP3A0A140T963 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF103-CHMP3A0A140T963 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.74■□□□□ 0.59
RNF103-CHMP3A0A140T963 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF103-CHMP3A0A140T963 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF103-CHMP3A0A140T963 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF103-CHMP3A0A140T963 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.74■□□□□ 0.59
RNF103-CHMP3A0A140T963 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF103-CHMP3A0A140T963 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RNF103-CHMP3A0A140T963 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RNF103-CHMP3A0A140T963 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
RNF103-CHMP3A0A140T963 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC18.74■□□□□ 0.59
RNF103-CHMP3A0A140T963 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RNF103-CHMP3A0A140T963 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF103-CHMP3A0A140T963 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC18.74■□□□□ 0.59
RNF103-CHMP3A0A140T963 METTL26-203ENST00000397664 604 ntTSL 2 BASIC18.74■□□□□ 0.59
RNF103-CHMP3A0A140T963 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms