Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC24.32■■□□□ 1.48
LRCH1Q9Y2L9 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
LRCH1Q9Y2L9 AC091060.1-201ENST00000623524 1766 ntBASIC24.31■■□□□ 1.48
LRCH1Q9Y2L9 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
LRCH1Q9Y2L9 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC24.31■■□□□ 1.48
LRCH1Q9Y2L9 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
LRCH1Q9Y2L9 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC24.31■■□□□ 1.48
LRCH1Q9Y2L9 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
LRCH1Q9Y2L9 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC24.3■■□□□ 1.48
LRCH1Q9Y2L9 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC24.3■■□□□ 1.48
LRCH1Q9Y2L9 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
LRCH1Q9Y2L9 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
LRCH1Q9Y2L9 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC24.3■■□□□ 1.48
LRCH1Q9Y2L9 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC24.29■■□□□ 1.48
LRCH1Q9Y2L9 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
LRCH1Q9Y2L9 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
LRCH1Q9Y2L9 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
LRCH1Q9Y2L9 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
LRCH1Q9Y2L9 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
LRCH1Q9Y2L9 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC24.28■■□□□ 1.48
LRCH1Q9Y2L9 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC24.28■■□□□ 1.48
LRCH1Q9Y2L9 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC24.28■■□□□ 1.48
LRCH1Q9Y2L9 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
LRCH1Q9Y2L9 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC24.27■■□□□ 1.48
LRCH1Q9Y2L9 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC24.27■■□□□ 1.48
LRCH1Q9Y2L9 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC24.27■■□□□ 1.48
LRCH1Q9Y2L9 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
LRCH1Q9Y2L9 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
LRCH1Q9Y2L9 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
LRCH1Q9Y2L9 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC24.26■■□□□ 1.47
LRCH1Q9Y2L9 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC24.26■■□□□ 1.47
LRCH1Q9Y2L9 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC24.26■■□□□ 1.47
LRCH1Q9Y2L9 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
LRCH1Q9Y2L9 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
LRCH1Q9Y2L9 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC24.25■■□□□ 1.47
LRCH1Q9Y2L9 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
LRCH1Q9Y2L9 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC24.24■■□□□ 1.47
LRCH1Q9Y2L9 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
LRCH1Q9Y2L9 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
LRCH1Q9Y2L9 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
LRCH1Q9Y2L9 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC24.23■■□□□ 1.47
LRCH1Q9Y2L9 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC24.22■■□□□ 1.47
LRCH1Q9Y2L9 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC24.22■■□□□ 1.47
LRCH1Q9Y2L9 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC24.22■■□□□ 1.47
LRCH1Q9Y2L9 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
LRCH1Q9Y2L9 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
LRCH1Q9Y2L9 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
LRCH1Q9Y2L9 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
LRCH1Q9Y2L9 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
LRCH1Q9Y2L9 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC24.2■■□□□ 1.46
LRCH1Q9Y2L9 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
LRCH1Q9Y2L9 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
LRCH1Q9Y2L9 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
LRCH1Q9Y2L9 PROC-203ENST00000409048 1586 ntTSL 5 BASIC24.18■■□□□ 1.46
LRCH1Q9Y2L9 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
LRCH1Q9Y2L9 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC24.18■■□□□ 1.46
LRCH1Q9Y2L9 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC24.18■■□□□ 1.46
LRCH1Q9Y2L9 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
LRCH1Q9Y2L9 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC24.18■■□□□ 1.46
LRCH1Q9Y2L9 RARA-203ENST00000394086 2008 ntTSL 2 BASIC24.18■■□□□ 1.46
LRCH1Q9Y2L9 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC24.18■■□□□ 1.46
LRCH1Q9Y2L9 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
LRCH1Q9Y2L9 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
LRCH1Q9Y2L9 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC24.17■■□□□ 1.46
LRCH1Q9Y2L9 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
LRCH1Q9Y2L9 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
LRCH1Q9Y2L9 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC24.16■■□□□ 1.46
LRCH1Q9Y2L9 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC24.16■■□□□ 1.46
LRCH1Q9Y2L9 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
LRCH1Q9Y2L9 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC24.16■■□□□ 1.46
LRCH1Q9Y2L9 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
LRCH1Q9Y2L9 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC24.15■■□□□ 1.46
LRCH1Q9Y2L9 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC24.15■■□□□ 1.46
LRCH1Q9Y2L9 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC24.14■■□□□ 1.46
LRCH1Q9Y2L9 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.46
LRCH1Q9Y2L9 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC24.14■■□□□ 1.45
LRCH1Q9Y2L9 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC24.14■■□□□ 1.45
LRCH1Q9Y2L9 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
LRCH1Q9Y2L9 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
LRCH1Q9Y2L9 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC24.14■■□□□ 1.45
LRCH1Q9Y2L9 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC24.13■■□□□ 1.45
LRCH1Q9Y2L9 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC24.13■■□□□ 1.45
LRCH1Q9Y2L9 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
LRCH1Q9Y2L9 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
LRCH1Q9Y2L9 AC145676.1-201ENST00000514988 2004 ntBASIC24.12■■□□□ 1.45
LRCH1Q9Y2L9 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC24.12■■□□□ 1.45
LRCH1Q9Y2L9 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
LRCH1Q9Y2L9 LINC01003-201ENST00000564834 1764 ntBASIC24.11■■□□□ 1.45
LRCH1Q9Y2L9 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
LRCH1Q9Y2L9 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
LRCH1Q9Y2L9 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
LRCH1Q9Y2L9 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC24.11■■□□□ 1.45
LRCH1Q9Y2L9 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
LRCH1Q9Y2L9 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
LRCH1Q9Y2L9 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC24.1■■□□□ 1.45
LRCH1Q9Y2L9 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
LRCH1Q9Y2L9 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
LRCH1Q9Y2L9 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
LRCH1Q9Y2L9 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
LRCH1Q9Y2L9 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 164.9 ms