Protein–RNA interactions for Protein: Q9UJ94

LINC00527, Putative uncharacterized protein encoded by LINC00527, humanhuman

Predictions only

Length 153 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00527Q9UJ94 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LINC00527Q9UJ94 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC20.3■□□□□ 0.84
LINC00527Q9UJ94 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC20.3■□□□□ 0.84
LINC00527Q9UJ94 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
LINC00527Q9UJ94 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
LINC00527Q9UJ94 AC016575.1-201ENST00000607026 382 ntBASIC20.29■□□□□ 0.84
LINC00527Q9UJ94 GDI1-215ENST00000630693 786 ntTSL 4 BASIC20.29■□□□□ 0.84
LINC00527Q9UJ94 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
LINC00527Q9UJ94 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC20.29■□□□□ 0.84
LINC00527Q9UJ94 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LINC00527Q9UJ94 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LINC00527Q9UJ94 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LINC00527Q9UJ94 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LINC00527Q9UJ94 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC20.28■□□□□ 0.84
LINC00527Q9UJ94 CHML-204ENST00000638121 920 ntTSL 2 BASIC20.28■□□□□ 0.84
LINC00527Q9UJ94 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC20.28■□□□□ 0.84
LINC00527Q9UJ94 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LINC00527Q9UJ94 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC20.27■□□□□ 0.84
LINC00527Q9UJ94 RPS2-202ENST00000526522 924 ntTSL 2 BASIC20.27■□□□□ 0.84
LINC00527Q9UJ94 MIR3648-2-201ENST00000581792 180 ntBASIC20.27■□□□□ 0.84
LINC00527Q9UJ94 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC20.27■□□□□ 0.84
LINC00527Q9UJ94 MIR3648-1-201ENST00000615959 180 ntBASIC20.27■□□□□ 0.84
LINC00527Q9UJ94 CR559946.2-201ENST00000623684 991 ntBASIC20.27■□□□□ 0.84
LINC00527Q9UJ94 AL139393.2-201ENST00000608721 2025 ntBASIC20.27■□□□□ 0.84
LINC00527Q9UJ94 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
LINC00527Q9UJ94 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
LINC00527Q9UJ94 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LINC00527Q9UJ94 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LINC00527Q9UJ94 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC20.26■□□□□ 0.83
LINC00527Q9UJ94 DUX4L13-201ENST00000554103 1267 ntBASIC20.26■□□□□ 0.83
LINC00527Q9UJ94 DUX4L15-201ENST00000611059 1267 ntBASIC20.26■□□□□ 0.83
LINC00527Q9UJ94 DUX4L23-201ENST00000615195 1269 ntBASIC20.26■□□□□ 0.83
LINC00527Q9UJ94 DUX4L24-201ENST00000617576 1269 ntBASIC20.26■□□□□ 0.83
LINC00527Q9UJ94 DUX4L22-201ENST00000618238 1269 ntBASIC20.26■□□□□ 0.83
LINC00527Q9UJ94 DUX4L20-201ENST00000619712 1269 ntBASIC20.26■□□□□ 0.83
LINC00527Q9UJ94 DUX4L21-201ENST00000622058 1269 ntBASIC20.26■□□□□ 0.83
LINC00527Q9UJ94 DUX4L10-201ENST00000622460 1267 ntBASIC20.26■□□□□ 0.83
LINC00527Q9UJ94 DUX4L25-201ENST00000624915 1269 ntBASIC20.26■□□□□ 0.83
LINC00527Q9UJ94 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LINC00527Q9UJ94 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LINC00527Q9UJ94 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LINC00527Q9UJ94 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
LINC00527Q9UJ94 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
LINC00527Q9UJ94 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
LINC00527Q9UJ94 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
LINC00527Q9UJ94 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
LINC00527Q9UJ94 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
LINC00527Q9UJ94 MACF1-219ENST00000484793 834 ntTSL 2 BASIC20.23■□□□□ 0.83
LINC00527Q9UJ94 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC20.23■□□□□ 0.83
LINC00527Q9UJ94 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC20.23■□□□□ 0.83
LINC00527Q9UJ94 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LINC00527Q9UJ94 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LINC00527Q9UJ94 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LINC00527Q9UJ94 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
LINC00527Q9UJ94 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
LINC00527Q9UJ94 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
LINC00527Q9UJ94 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC20.22■□□□□ 0.83
LINC00527Q9UJ94 AGPS-202ENST00000409888 815 ntTSL 4 BASIC20.22■□□□□ 0.83
LINC00527Q9UJ94 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC20.22■□□□□ 0.83
LINC00527Q9UJ94 CHST11-202ENST00000546689 756 ntTSL 2 BASIC20.22■□□□□ 0.83
LINC00527Q9UJ94 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC20.22■□□□□ 0.83
LINC00527Q9UJ94 ABCB10P3-201ENST00000561950 2166 ntBASIC20.22■□□□□ 0.83
LINC00527Q9UJ94 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LINC00527Q9UJ94 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
LINC00527Q9UJ94 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
LINC00527Q9UJ94 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
LINC00527Q9UJ94 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
LINC00527Q9UJ94 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
LINC00527Q9UJ94 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
LINC00527Q9UJ94 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
LINC00527Q9UJ94 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LINC00527Q9UJ94 HES6-205ENST00000409356 528 ntTSL 2 BASIC20.2■□□□□ 0.82
LINC00527Q9UJ94 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LINC00527Q9UJ94 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
LINC00527Q9UJ94 AC100797.4-201ENST00000631653 1827 ntBASIC20.19■□□□□ 0.82
LINC00527Q9UJ94 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LINC00527Q9UJ94 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC20.19■□□□□ 0.82
LINC00527Q9UJ94 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LINC00527Q9UJ94 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC20.18■□□□□ 0.82
LINC00527Q9UJ94 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC20.18■□□□□ 0.82
LINC00527Q9UJ94 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LINC00527Q9UJ94 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LINC00527Q9UJ94 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LINC00527Q9UJ94 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC20.18■□□□□ 0.82
LINC00527Q9UJ94 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC20.17■□□□□ 0.82
LINC00527Q9UJ94 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
LINC00527Q9UJ94 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LINC00527Q9UJ94 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC20.17■□□□□ 0.82
LINC00527Q9UJ94 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LINC00527Q9UJ94 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LINC00527Q9UJ94 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
LINC00527Q9UJ94 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LINC00527Q9UJ94 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC20.16■□□□□ 0.82
LINC00527Q9UJ94 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
LINC00527Q9UJ94 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC20.16■□□□□ 0.82
LINC00527Q9UJ94 METRNL-202ENST00000570778 967 ntTSL 5 BASIC20.15■□□□□ 0.82
LINC00527Q9UJ94 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
LINC00527Q9UJ94 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
LINC00527Q9UJ94 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
LINC00527Q9UJ94 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms