Protein–RNA interactions for Protein: Q9HB31

SEBOX, Homeobox protein SEBOX, humanhuman

Predicted RBP Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEBOXQ9HB31 AC044849.2-201ENST00000606596 710 ntBASIC21.58■■□□□ 1.05
SEBOXQ9HB31 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC21.58■■□□□ 1.04
SEBOXQ9HB31 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC21.57■■□□□ 1.04
SEBOXQ9HB31 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SEBOXQ9HB31 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC21.57■■□□□ 1.04
SEBOXQ9HB31 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
SEBOXQ9HB31 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SEBOXQ9HB31 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
SEBOXQ9HB31 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SEBOXQ9HB31 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SEBOXQ9HB31 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC21.55■■□□□ 1.04
SEBOXQ9HB31 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC21.55■■□□□ 1.04
SEBOXQ9HB31 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC21.55■■□□□ 1.04
SEBOXQ9HB31 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SEBOXQ9HB31 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC21.54■■□□□ 1.04
SEBOXQ9HB31 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC21.54■■□□□ 1.04
SEBOXQ9HB31 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SEBOXQ9HB31 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SEBOXQ9HB31 LINC00273-201ENST00000539813 1452 ntBASIC21.53■■□□□ 1.04
SEBOXQ9HB31 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
SEBOXQ9HB31 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC21.53■■□□□ 1.04
SEBOXQ9HB31 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
SEBOXQ9HB31 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SEBOXQ9HB31 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SEBOXQ9HB31 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC21.52■■□□□ 1.04
SEBOXQ9HB31 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SEBOXQ9HB31 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
SEBOXQ9HB31 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC21.51■■□□□ 1.03
SEBOXQ9HB31 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
SEBOXQ9HB31 AC142086.6-201ENST00000621154 1765 ntBASIC21.51■■□□□ 1.03
SEBOXQ9HB31 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SEBOXQ9HB31 PROC-203ENST00000409048 1586 ntTSL 5 BASIC21.51■■□□□ 1.03
SEBOXQ9HB31 MEST-211ENST00000437945 1455 ntTSL 5 BASIC21.51■■□□□ 1.03
SEBOXQ9HB31 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
SEBOXQ9HB31 AC135983.2-203ENST00000454486 1613 ntBASIC21.51■■□□□ 1.03
SEBOXQ9HB31 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SEBOXQ9HB31 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SEBOXQ9HB31 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
SEBOXQ9HB31 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC21.5■■□□□ 1.03
SEBOXQ9HB31 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SEBOXQ9HB31 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
SEBOXQ9HB31 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SEBOXQ9HB31 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SEBOXQ9HB31 CIB2-204ENST00000557846 934 ntTSL 3 BASIC21.49■■□□□ 1.03
SEBOXQ9HB31 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
SEBOXQ9HB31 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC21.49■■□□□ 1.03
SEBOXQ9HB31 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC21.48■■□□□ 1.03
SEBOXQ9HB31 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SEBOXQ9HB31 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SEBOXQ9HB31 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
SEBOXQ9HB31 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SEBOXQ9HB31 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SEBOXQ9HB31 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
SEBOXQ9HB31 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SEBOXQ9HB31 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SEBOXQ9HB31 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SEBOXQ9HB31 BOD1-206ENST00000480951 814 ntTSL 2 BASIC21.47■■□□□ 1.03
SEBOXQ9HB31 DRD5P2-201ENST00000421395 2012 ntBASIC21.46■■□□□ 1.03
SEBOXQ9HB31 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
SEBOXQ9HB31 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC21.46■■□□□ 1.03
SEBOXQ9HB31 CALM3-209ENST00000597743 577 ntTSL 4 BASIC21.46■■□□□ 1.03
SEBOXQ9HB31 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SEBOXQ9HB31 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SEBOXQ9HB31 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC21.45■■□□□ 1.02
SEBOXQ9HB31 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SEBOXQ9HB31 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
SEBOXQ9HB31 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC21.45■■□□□ 1.02
SEBOXQ9HB31 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.02
SEBOXQ9HB31 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC21.45■■□□□ 1.02
SEBOXQ9HB31 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC21.45■■□□□ 1.02
SEBOXQ9HB31 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SEBOXQ9HB31 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SEBOXQ9HB31 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC21.44■■□□□ 1.02
SEBOXQ9HB31 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC21.44■■□□□ 1.02
SEBOXQ9HB31 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC21.44■■□□□ 1.02
SEBOXQ9HB31 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SEBOXQ9HB31 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SEBOXQ9HB31 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SEBOXQ9HB31 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SEBOXQ9HB31 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
SEBOXQ9HB31 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SEBOXQ9HB31 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SEBOXQ9HB31 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC21.42■■□□□ 1.02
SEBOXQ9HB31 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
SEBOXQ9HB31 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
SEBOXQ9HB31 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
SEBOXQ9HB31 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC21.41■■□□□ 1.02
SEBOXQ9HB31 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC21.4■■□□□ 1.02
SEBOXQ9HB31 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SEBOXQ9HB31 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SEBOXQ9HB31 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
SEBOXQ9HB31 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
SEBOXQ9HB31 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC21.39■■□□□ 1.02
SEBOXQ9HB31 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SEBOXQ9HB31 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SEBOXQ9HB31 WHAMMP2-203ENST00000563942 1603 ntBASIC21.39■■□□□ 1.01
SEBOXQ9HB31 AP002414.2-202ENST00000590929 1450 ntBASIC21.39■■□□□ 1.01
SEBOXQ9HB31 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC21.39■■□□□ 1.01
SEBOXQ9HB31 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC21.38■■□□□ 1.01
SEBOXQ9HB31 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms