Protein–RNA interactions for Protein: Q9H3S7

PTPN23, Tyrosine-protein phosphatase non-receptor type 23, humanhuman

Predictions only

Length 1,636 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN23Q9H3S7 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC39.36■■■■□ 3.89
PTPN23Q9H3S7 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC39.35■■■■□ 3.89
PTPN23Q9H3S7 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC39.35■■■■□ 3.89
PTPN23Q9H3S7 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC39.35■■■■□ 3.89
PTPN23Q9H3S7 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC39.33■■■■□ 3.89
PTPN23Q9H3S7 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC39.33■■■■□ 3.89
PTPN23Q9H3S7 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC39.33■■■■□ 3.89
PTPN23Q9H3S7 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC39.32■■■■□ 3.89
PTPN23Q9H3S7 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC39.32■■■■□ 3.89
PTPN23Q9H3S7 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC39.31■■■■□ 3.88
PTPN23Q9H3S7 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC39.31■■■■□ 3.88
PTPN23Q9H3S7 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC39.31■■■■□ 3.88
PTPN23Q9H3S7 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC39.31■■■■□ 3.88
PTPN23Q9H3S7 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC39.31■■■■□ 3.88
PTPN23Q9H3S7 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC39.31■■■■□ 3.88
PTPN23Q9H3S7 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC39.31■■■■□ 3.88
PTPN23Q9H3S7 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC39.31■■■■□ 3.88
PTPN23Q9H3S7 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC39.31■■■■□ 3.88
PTPN23Q9H3S7 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC39.31■■■■□ 3.88
PTPN23Q9H3S7 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC39.3■■■■□ 3.88
PTPN23Q9H3S7 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC39.29■■■■□ 3.88
PTPN23Q9H3S7 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC39.28■■■■□ 3.88
PTPN23Q9H3S7 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC39.28■■■■□ 3.88
PTPN23Q9H3S7 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC39.28■■■■□ 3.88
PTPN23Q9H3S7 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC39.28■■■■□ 3.88
PTPN23Q9H3S7 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC39.27■■■■□ 3.88
PTPN23Q9H3S7 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC39.27■■■■□ 3.88
PTPN23Q9H3S7 ABHD17AP3-201ENST00000503096 1137 ntBASIC39.27■■■■□ 3.88
PTPN23Q9H3S7 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC39.27■■■■□ 3.88
PTPN23Q9H3S7 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC39.26■■■■□ 3.88
PTPN23Q9H3S7 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC39.25■■■■□ 3.87
PTPN23Q9H3S7 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC39.25■■■■□ 3.87
PTPN23Q9H3S7 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC39.25■■■■□ 3.87
PTPN23Q9H3S7 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC39.24■■■■□ 3.87
PTPN23Q9H3S7 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC39.24■■■■□ 3.87
PTPN23Q9H3S7 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC39.23■■■■□ 3.87
PTPN23Q9H3S7 BRD4-212ENST00000630599 726 ntTSL 2 BASIC39.23■■■■□ 3.87
PTPN23Q9H3S7 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC39.22■■■■□ 3.87
PTPN23Q9H3S7 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC39.22■■■■□ 3.87
PTPN23Q9H3S7 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC39.22■■■■□ 3.87
PTPN23Q9H3S7 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC39.22■■■■□ 3.87
PTPN23Q9H3S7 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC39.22■■■■□ 3.87
PTPN23Q9H3S7 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC39.22■■■■□ 3.87
PTPN23Q9H3S7 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC39.2■■■■□ 3.87
PTPN23Q9H3S7 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC39.2■■■■□ 3.87
PTPN23Q9H3S7 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC39.2■■■■□ 3.87
PTPN23Q9H3S7 PEX7-203ENST00000541292 945 ntTSL 5 BASIC39.19■■■■□ 3.86
PTPN23Q9H3S7 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC39.19■■■■□ 3.86
PTPN23Q9H3S7 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC39.19■■■■□ 3.86
PTPN23Q9H3S7 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC39.18■■■■□ 3.86
PTPN23Q9H3S7 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC39.18■■■■□ 3.86
PTPN23Q9H3S7 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC39.17■■■■□ 3.86
PTPN23Q9H3S7 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC39.16■■■■□ 3.86
PTPN23Q9H3S7 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC39.16■■■■□ 3.86
PTPN23Q9H3S7 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC39.16■■■■□ 3.86
PTPN23Q9H3S7 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC39.16■■■■□ 3.86
PTPN23Q9H3S7 AC110285.7-201ENST00000624417 1536 ntBASIC39.15■■■■□ 3.86
PTPN23Q9H3S7 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC39.14■■■■□ 3.86
PTPN23Q9H3S7 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC39.14■■■■□ 3.86
PTPN23Q9H3S7 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC39.13■■■■□ 3.86
PTPN23Q9H3S7 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC39.13■■■■□ 3.85
PTPN23Q9H3S7 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC39.13■■■■□ 3.85
PTPN23Q9H3S7 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC39.12■■■■□ 3.85
PTPN23Q9H3S7 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC39.12■■■■□ 3.85
PTPN23Q9H3S7 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC39.12■■■■□ 3.85
PTPN23Q9H3S7 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC39.12■■■■□ 3.85
PTPN23Q9H3S7 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC39.12■■■■□ 3.85
PTPN23Q9H3S7 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC39.12■■■■□ 3.85
PTPN23Q9H3S7 AC008813.1-201ENST00000536597 885 ntBASIC39.11■■■■□ 3.85
PTPN23Q9H3S7 MEST-211ENST00000437945 1455 ntTSL 5 BASIC39.11■■■■□ 3.85
PTPN23Q9H3S7 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC39.1■■■■□ 3.85
PTPN23Q9H3S7 AC148477.6-201ENST00000623746 465 ntBASIC39.1■■■■□ 3.85
PTPN23Q9H3S7 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC39.1■■■■□ 3.85
PTPN23Q9H3S7 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC39.09■■■■□ 3.85
PTPN23Q9H3S7 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC39.08■■■■□ 3.85
PTPN23Q9H3S7 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC39.08■■■■□ 3.85
PTPN23Q9H3S7 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC39.07■■■■□ 3.85
PTPN23Q9H3S7 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC39.07■■■■□ 3.85
PTPN23Q9H3S7 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC39.07■■■■□ 3.85
PTPN23Q9H3S7 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC39.07■■■■□ 3.84
PTPN23Q9H3S7 RPS2-210ENST00000530225 765 ntTSL 2 BASIC39.06■■■■□ 3.84
PTPN23Q9H3S7 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC39.06■■■■□ 3.84
PTPN23Q9H3S7 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC39.06■■■■□ 3.84
PTPN23Q9H3S7 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC39.04■■■■□ 3.84
PTPN23Q9H3S7 ST7-205ENST00000393446 2114 ntTSL 5 BASIC39.04■■■■□ 3.84
PTPN23Q9H3S7 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC39.03■■■■□ 3.84
PTPN23Q9H3S7 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC39.03■■■■□ 3.84
PTPN23Q9H3S7 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC39.03■■■■□ 3.84
PTPN23Q9H3S7 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC39.03■■■■□ 3.84
PTPN23Q9H3S7 TPT1-202ENST00000379055 948 ntTSL 2 BASIC39.03■■■■□ 3.84
PTPN23Q9H3S7 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC39.03■■■■□ 3.84
PTPN23Q9H3S7 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC39.02■■■■□ 3.84
PTPN23Q9H3S7 GPX1-201ENST00000419349 1106 ntBASIC39.02■■■■□ 3.84
PTPN23Q9H3S7 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC39.02■■■■□ 3.84
PTPN23Q9H3S7 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC39.02■■■■□ 3.84
PTPN23Q9H3S7 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC39.01■■■■□ 3.84
PTPN23Q9H3S7 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC39.01■■■■□ 3.83
PTPN23Q9H3S7 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC39.01■■■■□ 3.83
PTPN23Q9H3S7 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC39■■■■□ 3.83
PTPN23Q9H3S7 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC39■■■■□ 3.83
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms