Protein–RNA interactions for Protein: Q9H2H0

CXXC4, CXXC-type zinc finger protein 4, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC4Q9H2H0 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CXXC4Q9H2H0 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CXXC4Q9H2H0 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
CXXC4Q9H2H0 AC010864.1-201ENST00000609407 1511 ntBASIC22.42■■□□□ 1.18
CXXC4Q9H2H0 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
CXXC4Q9H2H0 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC22.42■■□□□ 1.18
CXXC4Q9H2H0 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
CXXC4Q9H2H0 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CXXC4Q9H2H0 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC22.41■■□□□ 1.18
CXXC4Q9H2H0 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CXXC4Q9H2H0 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC22.41■■□□□ 1.18
CXXC4Q9H2H0 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CXXC4Q9H2H0 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
CXXC4Q9H2H0 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CXXC4Q9H2H0 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CXXC4Q9H2H0 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
CXXC4Q9H2H0 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
CXXC4Q9H2H0 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC22.4■■□□□ 1.18
CXXC4Q9H2H0 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
CXXC4Q9H2H0 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC22.4■■□□□ 1.18
CXXC4Q9H2H0 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
CXXC4Q9H2H0 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
CXXC4Q9H2H0 NTF6A-201ENST00000591175 560 ntBASIC22.39■■□□□ 1.17
CXXC4Q9H2H0 AC012354.3-201ENST00000623734 483 ntBASIC22.39■■□□□ 1.17
CXXC4Q9H2H0 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC22.38■■□□□ 1.17
CXXC4Q9H2H0 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CXXC4Q9H2H0 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC22.38■■□□□ 1.17
CXXC4Q9H2H0 TPT1-202ENST00000379055 948 ntTSL 2 BASIC22.38■■□□□ 1.17
CXXC4Q9H2H0 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
CXXC4Q9H2H0 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
CXXC4Q9H2H0 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC22.38■■□□□ 1.17
CXXC4Q9H2H0 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
CXXC4Q9H2H0 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CXXC4Q9H2H0 EI24-212ENST00000615917 1407 ntTSL 2 BASIC22.37■■□□□ 1.17
CXXC4Q9H2H0 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CXXC4Q9H2H0 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CXXC4Q9H2H0 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CXXC4Q9H2H0 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CXXC4Q9H2H0 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
CXXC4Q9H2H0 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
CXXC4Q9H2H0 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC22.35■■□□□ 1.17
CXXC4Q9H2H0 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC22.34■■□□□ 1.17
CXXC4Q9H2H0 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.17
CXXC4Q9H2H0 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CXXC4Q9H2H0 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC22.33■■□□□ 1.16
CXXC4Q9H2H0 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.16
CXXC4Q9H2H0 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
CXXC4Q9H2H0 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CXXC4Q9H2H0 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
CXXC4Q9H2H0 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
CXXC4Q9H2H0 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC22.31■■□□□ 1.16
CXXC4Q9H2H0 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
CXXC4Q9H2H0 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
CXXC4Q9H2H0 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
CXXC4Q9H2H0 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
CXXC4Q9H2H0 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
CXXC4Q9H2H0 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC22.3■■□□□ 1.16
CXXC4Q9H2H0 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC22.3■■□□□ 1.16
CXXC4Q9H2H0 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CXXC4Q9H2H0 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CXXC4Q9H2H0 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
CXXC4Q9H2H0 CEP120-209ENST00000515110 606 ntTSL 3 BASIC22.29■■□□□ 1.16
CXXC4Q9H2H0 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CXXC4Q9H2H0 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CXXC4Q9H2H0 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC22.28■■□□□ 1.16
CXXC4Q9H2H0 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CXXC4Q9H2H0 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CXXC4Q9H2H0 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CXXC4Q9H2H0 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC22.27■■□□□ 1.16
CXXC4Q9H2H0 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
CXXC4Q9H2H0 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
CXXC4Q9H2H0 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
CXXC4Q9H2H0 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
CXXC4Q9H2H0 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC22.26■■□□□ 1.15
CXXC4Q9H2H0 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CXXC4Q9H2H0 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
CXXC4Q9H2H0 CHST11-202ENST00000546689 756 ntTSL 2 BASIC22.26■■□□□ 1.15
CXXC4Q9H2H0 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
CXXC4Q9H2H0 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
CXXC4Q9H2H0 HES4-202ENST00000428771 1040 ntTSL 2 BASIC22.24■■□□□ 1.15
CXXC4Q9H2H0 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CXXC4Q9H2H0 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC22.24■■□□□ 1.15
CXXC4Q9H2H0 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CXXC4Q9H2H0 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
CXXC4Q9H2H0 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
CXXC4Q9H2H0 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CXXC4Q9H2H0 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
CXXC4Q9H2H0 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CXXC4Q9H2H0 AC018358.1-201ENST00000631079 1402 ntBASIC22.22■■□□□ 1.15
CXXC4Q9H2H0 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CXXC4Q9H2H0 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CXXC4Q9H2H0 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
CXXC4Q9H2H0 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC22.21■■□□□ 1.15
CXXC4Q9H2H0 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
CXXC4Q9H2H0 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
CXXC4Q9H2H0 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC22.21■■□□□ 1.15
CXXC4Q9H2H0 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
CXXC4Q9H2H0 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC22.21■■□□□ 1.15
CXXC4Q9H2H0 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
CXXC4Q9H2H0 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms