Protein–RNA interactions for Protein: Q9H094

NBPF3, Neuroblastoma breakpoint family member 3, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF3Q9H094 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC30.67■■■□□ 2.5
NBPF3Q9H094 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
NBPF3Q9H094 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC30.67■■■□□ 2.5
NBPF3Q9H094 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC30.66■■■□□ 2.5
NBPF3Q9H094 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC30.66■■■□□ 2.5
NBPF3Q9H094 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC30.65■■■□□ 2.5
NBPF3Q9H094 RNF166-209ENST00000567844 633 ntTSL 5 BASIC30.65■■■□□ 2.5
NBPF3Q9H094 MIR3648-2-201ENST00000581792 180 ntBASIC30.65■■■□□ 2.5
NBPF3Q9H094 MIR3648-1-201ENST00000615959 180 ntBASIC30.65■■■□□ 2.5
NBPF3Q9H094 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC30.65■■■□□ 2.5
NBPF3Q9H094 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
NBPF3Q9H094 AC016575.1-201ENST00000607026 382 ntBASIC30.64■■■□□ 2.5
NBPF3Q9H094 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC30.64■■■□□ 2.5
NBPF3Q9H094 BRD4-212ENST00000630599 726 ntTSL 2 BASIC30.64■■■□□ 2.5
NBPF3Q9H094 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
NBPF3Q9H094 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
NBPF3Q9H094 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC30.63■■■□□ 2.49
NBPF3Q9H094 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC30.63■■■□□ 2.49
NBPF3Q9H094 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC30.62■■■□□ 2.49
NBPF3Q9H094 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC30.62■■■□□ 2.49
NBPF3Q9H094 GDI1-215ENST00000630693 786 ntTSL 4 BASIC30.62■■■□□ 2.49
NBPF3Q9H094 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC30.62■■■□□ 2.49
NBPF3Q9H094 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
NBPF3Q9H094 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC30.61■■■□□ 2.49
NBPF3Q9H094 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC30.6■■■□□ 2.49
NBPF3Q9H094 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
NBPF3Q9H094 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC30.58■■■□□ 2.49
NBPF3Q9H094 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC30.58■■■□□ 2.49
NBPF3Q9H094 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
NBPF3Q9H094 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC30.56■■■□□ 2.48
NBPF3Q9H094 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
NBPF3Q9H094 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC30.56■■■□□ 2.48
NBPF3Q9H094 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC30.56■■■□□ 2.48
NBPF3Q9H094 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC30.56■■■□□ 2.48
NBPF3Q9H094 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC30.56■■■□□ 2.48
NBPF3Q9H094 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC30.56■■■□□ 2.48
NBPF3Q9H094 AP004833.2-201ENST00000532228 1454 ntBASIC30.56■■■□□ 2.48
NBPF3Q9H094 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC30.56■■■□□ 2.48
NBPF3Q9H094 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC30.55■■■□□ 2.48
NBPF3Q9H094 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC30.55■■■□□ 2.48
NBPF3Q9H094 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
NBPF3Q9H094 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC30.55■■■□□ 2.48
NBPF3Q9H094 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
NBPF3Q9H094 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC30.55■■■□□ 2.48
NBPF3Q9H094 LINC01971-201ENST00000617888 1048 ntBASIC30.54■■■□□ 2.48
NBPF3Q9H094 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
NBPF3Q9H094 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
NBPF3Q9H094 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.48
NBPF3Q9H094 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC30.51■■■□□ 2.47
NBPF3Q9H094 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
NBPF3Q9H094 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC30.51■■■□□ 2.47
NBPF3Q9H094 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
NBPF3Q9H094 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC30.5■■■□□ 2.47
NBPF3Q9H094 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
NBPF3Q9H094 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
NBPF3Q9H094 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC30.49■■■□□ 2.47
NBPF3Q9H094 AGPS-202ENST00000409888 815 ntTSL 4 BASIC30.49■■■□□ 2.47
NBPF3Q9H094 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC30.49■■■□□ 2.47
NBPF3Q9H094 AC100797.4-201ENST00000631653 1827 ntBASIC30.48■■■□□ 2.47
NBPF3Q9H094 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC30.48■■■□□ 2.47
NBPF3Q9H094 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC30.48■■■□□ 2.47
NBPF3Q9H094 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC30.48■■■□□ 2.47
NBPF3Q9H094 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
NBPF3Q9H094 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC30.47■■■□□ 2.47
NBPF3Q9H094 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC30.47■■■□□ 2.47
NBPF3Q9H094 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC30.47■■■□□ 2.47
NBPF3Q9H094 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC30.47■■■□□ 2.47
NBPF3Q9H094 DUX4L11-201ENST00000611504 1267 ntBASIC30.47■■■□□ 2.47
NBPF3Q9H094 DUX4L12-201ENST00000614593 1267 ntBASIC30.47■■■□□ 2.47
NBPF3Q9H094 DUX4L14-201ENST00000621227 1267 ntBASIC30.47■■■□□ 2.47
NBPF3Q9H094 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
NBPF3Q9H094 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
NBPF3Q9H094 ABHD17AP3-201ENST00000503096 1137 ntBASIC30.46■■■□□ 2.47
NBPF3Q9H094 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
NBPF3Q9H094 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC30.45■■■□□ 2.47
NBPF3Q9H094 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.46
NBPF3Q9H094 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC30.44■■■□□ 2.46
NBPF3Q9H094 CR559946.2-201ENST00000623684 991 ntBASIC30.44■■■□□ 2.46
NBPF3Q9H094 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC30.44■■■□□ 2.46
NBPF3Q9H094 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC30.43■■■□□ 2.46
NBPF3Q9H094 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC30.43■■■□□ 2.46
NBPF3Q9H094 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
NBPF3Q9H094 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC30.42■■■□□ 2.46
NBPF3Q9H094 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC30.42■■■□□ 2.46
NBPF3Q9H094 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
NBPF3Q9H094 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC30.42■■■□□ 2.46
NBPF3Q9H094 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
NBPF3Q9H094 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
NBPF3Q9H094 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
NBPF3Q9H094 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC30.41■■■□□ 2.46
NBPF3Q9H094 MEST-211ENST00000437945 1455 ntTSL 5 BASIC30.4■■■□□ 2.46
NBPF3Q9H094 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC30.4■■■□□ 2.46
NBPF3Q9H094 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
NBPF3Q9H094 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC30.4■■■□□ 2.46
NBPF3Q9H094 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC30.4■■■□□ 2.46
NBPF3Q9H094 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC30.39■■■□□ 2.46
NBPF3Q9H094 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.45
NBPF3Q9H094 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC30.38■■■□□ 2.45
NBPF3Q9H094 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC30.38■■■□□ 2.45
NBPF3Q9H094 CHML-204ENST00000638121 920 ntTSL 2 BASIC30.38■■■□□ 2.45
Retrieved 100 of 98,524 protein–RNA pairs in 14 ms