Protein–RNA interactions for Protein: Q9BWD3

RTL8A, Retrotransposon Gag-like protein 8A, humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL8AQ9BWD3 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
RTL8AQ9BWD3 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC21.88■■□□□ 1.09
RTL8AQ9BWD3 AC142086.6-201ENST00000621154 1765 ntBASIC21.88■■□□□ 1.09
RTL8AQ9BWD3 LINC00273-201ENST00000539813 1452 ntBASIC21.88■■□□□ 1.09
RTL8AQ9BWD3 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC21.88■■□□□ 1.09
RTL8AQ9BWD3 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
RTL8AQ9BWD3 DRD5P2-201ENST00000421395 2012 ntBASIC21.87■■□□□ 1.09
RTL8AQ9BWD3 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RTL8AQ9BWD3 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
RTL8AQ9BWD3 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RTL8AQ9BWD3 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
RTL8AQ9BWD3 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC21.86■■□□□ 1.09
RTL8AQ9BWD3 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC21.86■■□□□ 1.09
RTL8AQ9BWD3 RPS2P35-201ENST00000443417 897 ntBASIC21.86■■□□□ 1.09
RTL8AQ9BWD3 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RTL8AQ9BWD3 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
RTL8AQ9BWD3 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
RTL8AQ9BWD3 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
RTL8AQ9BWD3 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
RTL8AQ9BWD3 AC135983.2-203ENST00000454486 1613 ntBASIC21.85■■□□□ 1.09
RTL8AQ9BWD3 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC21.85■■□□□ 1.09
RTL8AQ9BWD3 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC21.85■■□□□ 1.09
RTL8AQ9BWD3 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RTL8AQ9BWD3 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RTL8AQ9BWD3 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RTL8AQ9BWD3 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC21.84■■□□□ 1.09
RTL8AQ9BWD3 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC21.84■■□□□ 1.09
RTL8AQ9BWD3 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RTL8AQ9BWD3 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
RTL8AQ9BWD3 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
RTL8AQ9BWD3 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
RTL8AQ9BWD3 MEST-211ENST00000437945 1455 ntTSL 5 BASIC21.83■■□□□ 1.08
RTL8AQ9BWD3 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC21.82■■□□□ 1.08
RTL8AQ9BWD3 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RTL8AQ9BWD3 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RTL8AQ9BWD3 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
RTL8AQ9BWD3 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
RTL8AQ9BWD3 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC21.82■■□□□ 1.08
RTL8AQ9BWD3 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC21.82■■□□□ 1.08
RTL8AQ9BWD3 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RTL8AQ9BWD3 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
RTL8AQ9BWD3 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RTL8AQ9BWD3 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
RTL8AQ9BWD3 AC100797.4-201ENST00000631653 1827 ntBASIC21.81■■□□□ 1.08
RTL8AQ9BWD3 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RTL8AQ9BWD3 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
RTL8AQ9BWD3 CALM3-209ENST00000597743 577 ntTSL 4 BASIC21.81■■□□□ 1.08
RTL8AQ9BWD3 WHAMMP2-203ENST00000563942 1603 ntBASIC21.8■■□□□ 1.08
RTL8AQ9BWD3 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC21.8■■□□□ 1.08
RTL8AQ9BWD3 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC21.8■■□□□ 1.08
RTL8AQ9BWD3 DUX4L29-201ENST00000425409 679 ntBASIC21.8■■□□□ 1.08
RTL8AQ9BWD3 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RTL8AQ9BWD3 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RTL8AQ9BWD3 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC21.8■■□□□ 1.08
RTL8AQ9BWD3 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC21.8■■□□□ 1.08
RTL8AQ9BWD3 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC21.8■■□□□ 1.08
RTL8AQ9BWD3 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC21.79■■□□□ 1.08
RTL8AQ9BWD3 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC21.79■■□□□ 1.08
RTL8AQ9BWD3 PROC-203ENST00000409048 1586 ntTSL 5 BASIC21.78■■□□□ 1.08
RTL8AQ9BWD3 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RTL8AQ9BWD3 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC21.78■■□□□ 1.08
RTL8AQ9BWD3 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RTL8AQ9BWD3 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC21.78■■□□□ 1.08
RTL8AQ9BWD3 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
RTL8AQ9BWD3 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC21.78■■□□□ 1.08
RTL8AQ9BWD3 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RTL8AQ9BWD3 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
RTL8AQ9BWD3 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC21.76■■□□□ 1.07
RTL8AQ9BWD3 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RTL8AQ9BWD3 AC021231.2-201ENST00000594613 730 ntBASIC21.76■■□□□ 1.07
RTL8AQ9BWD3 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
RTL8AQ9BWD3 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RTL8AQ9BWD3 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RTL8AQ9BWD3 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RTL8AQ9BWD3 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
RTL8AQ9BWD3 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
RTL8AQ9BWD3 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RTL8AQ9BWD3 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RTL8AQ9BWD3 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RTL8AQ9BWD3 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
RTL8AQ9BWD3 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
RTL8AQ9BWD3 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RTL8AQ9BWD3 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC21.73■■□□□ 1.07
RTL8AQ9BWD3 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC21.73■■□□□ 1.07
RTL8AQ9BWD3 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
RTL8AQ9BWD3 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RTL8AQ9BWD3 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
RTL8AQ9BWD3 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
RTL8AQ9BWD3 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
RTL8AQ9BWD3 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC21.72■■□□□ 1.07
RTL8AQ9BWD3 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC21.72■■□□□ 1.07
RTL8AQ9BWD3 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC21.72■■□□□ 1.07
RTL8AQ9BWD3 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC21.71■■□□□ 1.07
RTL8AQ9BWD3 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC21.71■■□□□ 1.07
RTL8AQ9BWD3 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RTL8AQ9BWD3 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC21.71■■□□□ 1.07
RTL8AQ9BWD3 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RTL8AQ9BWD3 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
RTL8AQ9BWD3 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RTL8AQ9BWD3 AP002414.2-202ENST00000590929 1450 ntBASIC21.7■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms