Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC26.57■■□□□ 1.84
PCDH19Q8TAB3 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
PCDH19Q8TAB3 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
PCDH19Q8TAB3 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC26.57■■□□□ 1.84
PCDH19Q8TAB3 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC26.57■■□□□ 1.84
PCDH19Q8TAB3 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC26.56■■□□□ 1.84
PCDH19Q8TAB3 AC100797.4-201ENST00000631653 1827 ntBASIC26.56■■□□□ 1.84
PCDH19Q8TAB3 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC26.56■■□□□ 1.84
PCDH19Q8TAB3 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC26.56■■□□□ 1.84
PCDH19Q8TAB3 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
PCDH19Q8TAB3 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC26.56■■□□□ 1.84
PCDH19Q8TAB3 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC26.55■■□□□ 1.84
PCDH19Q8TAB3 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC26.55■■□□□ 1.84
PCDH19Q8TAB3 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC26.54■■□□□ 1.84
PCDH19Q8TAB3 AC135983.2-203ENST00000454486 1613 ntBASIC26.54■■□□□ 1.84
PCDH19Q8TAB3 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
PCDH19Q8TAB3 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
PCDH19Q8TAB3 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC26.54■■□□□ 1.84
PCDH19Q8TAB3 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC26.54■■□□□ 1.84
PCDH19Q8TAB3 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC26.54■■□□□ 1.84
PCDH19Q8TAB3 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
PCDH19Q8TAB3 CIB2-204ENST00000557846 934 ntTSL 3 BASIC26.53■■□□□ 1.84
PCDH19Q8TAB3 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC26.53■■□□□ 1.84
PCDH19Q8TAB3 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
PCDH19Q8TAB3 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.84
PCDH19Q8TAB3 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
PCDH19Q8TAB3 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC26.51■■□□□ 1.83
PCDH19Q8TAB3 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
PCDH19Q8TAB3 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
PCDH19Q8TAB3 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC26.51■■□□□ 1.83
PCDH19Q8TAB3 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC26.51■■□□□ 1.83
PCDH19Q8TAB3 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
PCDH19Q8TAB3 LINC00273-201ENST00000539813 1452 ntBASIC26.5■■□□□ 1.83
PCDH19Q8TAB3 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
PCDH19Q8TAB3 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC26.5■■□□□ 1.83
PCDH19Q8TAB3 WHAMMP2-203ENST00000563942 1603 ntBASIC26.5■■□□□ 1.83
PCDH19Q8TAB3 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC26.49■■□□□ 1.83
PCDH19Q8TAB3 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC26.49■■□□□ 1.83
PCDH19Q8TAB3 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC26.49■■□□□ 1.83
PCDH19Q8TAB3 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC26.49■■□□□ 1.83
PCDH19Q8TAB3 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC26.48■■□□□ 1.83
PCDH19Q8TAB3 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
PCDH19Q8TAB3 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC26.48■■□□□ 1.83
PCDH19Q8TAB3 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
PCDH19Q8TAB3 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
PCDH19Q8TAB3 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
PCDH19Q8TAB3 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC26.47■■□□□ 1.83
PCDH19Q8TAB3 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
PCDH19Q8TAB3 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC26.46■■□□□ 1.83
PCDH19Q8TAB3 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
PCDH19Q8TAB3 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC26.46■■□□□ 1.83
PCDH19Q8TAB3 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
PCDH19Q8TAB3 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC26.46■■□□□ 1.83
PCDH19Q8TAB3 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC26.45■■□□□ 1.82
PCDH19Q8TAB3 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
PCDH19Q8TAB3 BOD1-206ENST00000480951 814 ntTSL 2 BASIC26.45■■□□□ 1.82
PCDH19Q8TAB3 PROC-203ENST00000409048 1586 ntTSL 5 BASIC26.45■■□□□ 1.82
PCDH19Q8TAB3 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC26.44■■□□□ 1.82
PCDH19Q8TAB3 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
PCDH19Q8TAB3 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
PCDH19Q8TAB3 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC26.44■■□□□ 1.82
PCDH19Q8TAB3 ABHD17AP4-201ENST00000411545 909 ntBASIC26.43■■□□□ 1.82
PCDH19Q8TAB3 MLEC-202ENST00000412616 841 ntTSL 3 BASIC26.43■■□□□ 1.82
PCDH19Q8TAB3 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC26.43■■□□□ 1.82
PCDH19Q8TAB3 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC26.43■■□□□ 1.82
PCDH19Q8TAB3 MEST-211ENST00000437945 1455 ntTSL 5 BASIC26.42■■□□□ 1.82
PCDH19Q8TAB3 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
PCDH19Q8TAB3 CALM3-209ENST00000597743 577 ntTSL 4 BASIC26.42■■□□□ 1.82
PCDH19Q8TAB3 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
PCDH19Q8TAB3 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
PCDH19Q8TAB3 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
PCDH19Q8TAB3 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
PCDH19Q8TAB3 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
PCDH19Q8TAB3 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
PCDH19Q8TAB3 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
PCDH19Q8TAB3 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC26.39■■□□□ 1.82
PCDH19Q8TAB3 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
PCDH19Q8TAB3 AC021231.2-201ENST00000594613 730 ntBASIC26.38■■□□□ 1.81
PCDH19Q8TAB3 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC26.38■■□□□ 1.81
PCDH19Q8TAB3 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC26.37■■□□□ 1.81
PCDH19Q8TAB3 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
PCDH19Q8TAB3 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
PCDH19Q8TAB3 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC26.37■■□□□ 1.81
PCDH19Q8TAB3 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
PCDH19Q8TAB3 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC26.37■■□□□ 1.81
PCDH19Q8TAB3 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
PCDH19Q8TAB3 MIR7108-201ENST00000614319 87 ntBASIC26.36■■□□□ 1.81
PCDH19Q8TAB3 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC26.36■■□□□ 1.81
PCDH19Q8TAB3 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
PCDH19Q8TAB3 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC26.35■■□□□ 1.81
PCDH19Q8TAB3 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
PCDH19Q8TAB3 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
PCDH19Q8TAB3 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
PCDH19Q8TAB3 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC26.34■■□□□ 1.81
PCDH19Q8TAB3 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC26.34■■□□□ 1.81
PCDH19Q8TAB3 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC26.34■■□□□ 1.81
PCDH19Q8TAB3 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
PCDH19Q8TAB3 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
PCDH19Q8TAB3 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC26.33■■□□□ 1.81
PCDH19Q8TAB3 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC26.33■■□□□ 1.81
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms