Protein–RNA interactions for Protein: Q8IY18

SMC5, Structural maintenance of chromosomes protein 5, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5Q8IY18 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
SMC5Q8IY18 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
SMC5Q8IY18 AC100797.4-201ENST00000631653 1827 ntBASIC32■■■□□ 2.71
SMC5Q8IY18 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC32■■■□□ 2.71
SMC5Q8IY18 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
SMC5Q8IY18 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC31.99■■■□□ 2.71
SMC5Q8IY18 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC31.99■■■□□ 2.71
SMC5Q8IY18 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC31.99■■■□□ 2.71
SMC5Q8IY18 MIR6090-201ENST00000622481 60 ntBASIC31.98■■■□□ 2.71
SMC5Q8IY18 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
SMC5Q8IY18 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
SMC5Q8IY18 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC31.97■■■□□ 2.71
SMC5Q8IY18 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC31.97■■■□□ 2.71
SMC5Q8IY18 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
SMC5Q8IY18 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC31.96■■■□□ 2.71
SMC5Q8IY18 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
SMC5Q8IY18 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
SMC5Q8IY18 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC31.95■■■□□ 2.71
SMC5Q8IY18 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.7
SMC5Q8IY18 AC108673.1-201ENST00000510422 1159 ntBASIC31.94■■■□□ 2.7
SMC5Q8IY18 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
SMC5Q8IY18 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
SMC5Q8IY18 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC31.93■■■□□ 2.7
SMC5Q8IY18 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC31.92■■■□□ 2.7
SMC5Q8IY18 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC31.92■■■□□ 2.7
SMC5Q8IY18 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC31.92■■■□□ 2.7
SMC5Q8IY18 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
SMC5Q8IY18 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
SMC5Q8IY18 AC135983.2-203ENST00000454486 1613 ntBASIC31.91■■■□□ 2.7
SMC5Q8IY18 NRG1-221ENST00000614767 762 ntTSL 5 BASIC31.91■■■□□ 2.7
SMC5Q8IY18 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
SMC5Q8IY18 MIR3665-201ENST00000578708 105 ntBASIC31.9■■■□□ 2.7
SMC5Q8IY18 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC31.89■■■□□ 2.7
SMC5Q8IY18 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC31.89■■■□□ 2.7
SMC5Q8IY18 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
SMC5Q8IY18 AP006261.1-201ENST00000584783 668 ntBASIC31.88■■■□□ 2.69
SMC5Q8IY18 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
SMC5Q8IY18 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
SMC5Q8IY18 BX255925.1-201ENST00000566954 1854 ntBASIC31.88■■■□□ 2.69
SMC5Q8IY18 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC31.88■■■□□ 2.69
SMC5Q8IY18 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
SMC5Q8IY18 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC31.87■■■□□ 2.69
SMC5Q8IY18 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC31.87■■■□□ 2.69
SMC5Q8IY18 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC31.86■■■□□ 2.69
SMC5Q8IY18 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC31.85■■■□□ 2.69
SMC5Q8IY18 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
SMC5Q8IY18 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC31.84■■■□□ 2.69
SMC5Q8IY18 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC31.84■■■□□ 2.69
SMC5Q8IY18 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
SMC5Q8IY18 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
SMC5Q8IY18 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
SMC5Q8IY18 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC31.83■■■□□ 2.69
SMC5Q8IY18 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
SMC5Q8IY18 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC31.82■■■□□ 2.69
SMC5Q8IY18 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC31.82■■■□□ 2.68
SMC5Q8IY18 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC31.82■■■□□ 2.68
SMC5Q8IY18 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC31.82■■■□□ 2.68
SMC5Q8IY18 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC31.82■■■□□ 2.68
SMC5Q8IY18 EI24-212ENST00000615917 1407 ntTSL 2 BASIC31.82■■■□□ 2.68
SMC5Q8IY18 WHAMMP2-203ENST00000563942 1603 ntBASIC31.82■■■□□ 2.68
SMC5Q8IY18 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC31.82■■■□□ 2.68
SMC5Q8IY18 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC31.81■■■□□ 2.68
SMC5Q8IY18 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
SMC5Q8IY18 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC31.8■■■□□ 2.68
SMC5Q8IY18 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
SMC5Q8IY18 MEST-211ENST00000437945 1455 ntTSL 5 BASIC31.8■■■□□ 2.68
SMC5Q8IY18 AP002414.2-202ENST00000590929 1450 ntBASIC31.8■■■□□ 2.68
SMC5Q8IY18 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
SMC5Q8IY18 AL121749.1-202ENST00000609313 2153 ntBASIC31.8■■■□□ 2.68
SMC5Q8IY18 AC087741.3-201ENST00000624270 1347 ntBASIC31.79■■■□□ 2.68
SMC5Q8IY18 LINC00273-201ENST00000539813 1452 ntBASIC31.79■■■□□ 2.68
SMC5Q8IY18 LINC01003-201ENST00000564834 1764 ntBASIC31.79■■■□□ 2.68
SMC5Q8IY18 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC31.79■■■□□ 2.68
SMC5Q8IY18 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC31.79■■■□□ 2.68
SMC5Q8IY18 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
SMC5Q8IY18 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC31.79■■■□□ 2.68
SMC5Q8IY18 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC31.78■■■□□ 2.68
SMC5Q8IY18 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
SMC5Q8IY18 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
SMC5Q8IY18 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC31.77■■■□□ 2.68
SMC5Q8IY18 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
SMC5Q8IY18 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
SMC5Q8IY18 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC31.76■■■□□ 2.67
SMC5Q8IY18 AL162393.1-201ENST00000437852 946 ntBASIC31.75■■■□□ 2.67
SMC5Q8IY18 SHF-208ENST00000560734 1731 ntTSL 3 BASIC31.75■■■□□ 2.67
SMC5Q8IY18 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC31.74■■■□□ 2.67
SMC5Q8IY18 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
SMC5Q8IY18 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC31.72■■■□□ 2.67
SMC5Q8IY18 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
SMC5Q8IY18 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC31.71■■■□□ 2.67
SMC5Q8IY18 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
SMC5Q8IY18 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC31.68■■■□□ 2.66
SMC5Q8IY18 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
SMC5Q8IY18 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
SMC5Q8IY18 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC31.68■■■□□ 2.66
SMC5Q8IY18 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC31.68■■■□□ 2.66
SMC5Q8IY18 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
SMC5Q8IY18 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC31.67■■■□□ 2.66
SMC5Q8IY18 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC31.66■■■□□ 2.66
SMC5Q8IY18 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms