Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC23.36■■□□□ 1.33
RP1L1Q8IWN7 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC23.36■■□□□ 1.33
RP1L1Q8IWN7 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
RP1L1Q8IWN7 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC23.35■■□□□ 1.33
RP1L1Q8IWN7 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
RP1L1Q8IWN7 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
RP1L1Q8IWN7 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
RP1L1Q8IWN7 RARRES2P1-201ENST00000474487 481 ntBASIC23.34■■□□□ 1.33
RP1L1Q8IWN7 AL161658.1-201ENST00000623641 1967 ntBASIC23.34■■□□□ 1.33
RP1L1Q8IWN7 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC23.33■■□□□ 1.33
RP1L1Q8IWN7 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC23.33■■□□□ 1.33
RP1L1Q8IWN7 AC148477.6-201ENST00000623746 465 ntBASIC23.33■■□□□ 1.33
RP1L1Q8IWN7 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC23.33■■□□□ 1.32
RP1L1Q8IWN7 AC008813.1-201ENST00000536597 885 ntBASIC23.33■■□□□ 1.32
RP1L1Q8IWN7 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
RP1L1Q8IWN7 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC23.32■■□□□ 1.32
RP1L1Q8IWN7 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
RP1L1Q8IWN7 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC23.32■■□□□ 1.32
RP1L1Q8IWN7 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
RP1L1Q8IWN7 AC060814.1-201ENST00000554326 538 ntBASIC23.31■■□□□ 1.32
RP1L1Q8IWN7 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC23.31■■□□□ 1.32
RP1L1Q8IWN7 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
RP1L1Q8IWN7 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC23.31■■□□□ 1.32
RP1L1Q8IWN7 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
RP1L1Q8IWN7 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
RP1L1Q8IWN7 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC23.29■■□□□ 1.32
RP1L1Q8IWN7 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC23.29■■□□□ 1.32
RP1L1Q8IWN7 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
RP1L1Q8IWN7 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
RP1L1Q8IWN7 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
RP1L1Q8IWN7 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
RP1L1Q8IWN7 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
RP1L1Q8IWN7 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
RP1L1Q8IWN7 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
RP1L1Q8IWN7 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
RP1L1Q8IWN7 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC23.27■■□□□ 1.32
RP1L1Q8IWN7 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
RP1L1Q8IWN7 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
RP1L1Q8IWN7 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
RP1L1Q8IWN7 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
RP1L1Q8IWN7 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
RP1L1Q8IWN7 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC23.25■■□□□ 1.31
RP1L1Q8IWN7 AL035685.1-201ENST00000636663 812 ntBASIC23.25■■□□□ 1.31
RP1L1Q8IWN7 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
RP1L1Q8IWN7 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
RP1L1Q8IWN7 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
RP1L1Q8IWN7 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
RP1L1Q8IWN7 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
RP1L1Q8IWN7 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
RP1L1Q8IWN7 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
RP1L1Q8IWN7 GFER-205ENST00000569451 517 ntTSL 5 BASIC23.21■■□□□ 1.31
RP1L1Q8IWN7 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC23.21■■□□□ 1.31
RP1L1Q8IWN7 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
RP1L1Q8IWN7 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
RP1L1Q8IWN7 ATP5G2P3-201ENST00000429083 425 ntBASIC23.21■■□□□ 1.31
RP1L1Q8IWN7 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC23.21■■□□□ 1.31
RP1L1Q8IWN7 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
RP1L1Q8IWN7 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
RP1L1Q8IWN7 AC092296.2-201ENST00000589470 999 ntBASIC23.2■■□□□ 1.3
RP1L1Q8IWN7 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
RP1L1Q8IWN7 AC004987.1-201ENST00000428627 508 ntBASIC23.19■■□□□ 1.3
RP1L1Q8IWN7 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC23.19■■□□□ 1.3
RP1L1Q8IWN7 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC23.19■■□□□ 1.3
RP1L1Q8IWN7 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC23.19■■□□□ 1.3
RP1L1Q8IWN7 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC23.18■■□□□ 1.3
RP1L1Q8IWN7 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
RP1L1Q8IWN7 AC010864.1-201ENST00000609407 1511 ntBASIC23.18■■□□□ 1.3
RP1L1Q8IWN7 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
RP1L1Q8IWN7 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC23.18■■□□□ 1.3
RP1L1Q8IWN7 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
RP1L1Q8IWN7 GUK1-208ENST00000366728 842 ntTSL 2 BASIC23.17■■□□□ 1.3
RP1L1Q8IWN7 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC23.16■■□□□ 1.3
RP1L1Q8IWN7 AL592295.1-201ENST00000400984 884 ntBASIC23.16■■□□□ 1.3
RP1L1Q8IWN7 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC23.16■■□□□ 1.3
RP1L1Q8IWN7 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
RP1L1Q8IWN7 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
RP1L1Q8IWN7 TRIR-205ENST00000592273 783 ntTSL 3 BASIC23.15■■□□□ 1.3
RP1L1Q8IWN7 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
RP1L1Q8IWN7 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC23.15■■□□□ 1.3
RP1L1Q8IWN7 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
RP1L1Q8IWN7 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC23.15■■□□□ 1.3
RP1L1Q8IWN7 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC23.13■■□□□ 1.29
RP1L1Q8IWN7 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
RP1L1Q8IWN7 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
RP1L1Q8IWN7 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
RP1L1Q8IWN7 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
RP1L1Q8IWN7 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
RP1L1Q8IWN7 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC23.12■■□□□ 1.29
RP1L1Q8IWN7 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
RP1L1Q8IWN7 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
RP1L1Q8IWN7 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
RP1L1Q8IWN7 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC23.1■■□□□ 1.29
RP1L1Q8IWN7 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
RP1L1Q8IWN7 U85056.1-201ENST00000616429 682 ntBASIC23.1■■□□□ 1.29
RP1L1Q8IWN7 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
RP1L1Q8IWN7 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
RP1L1Q8IWN7 AL451085.2-201ENST00000605085 799 ntBASIC23.09■■□□□ 1.29
RP1L1Q8IWN7 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
RP1L1Q8IWN7 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC23.08■■□□□ 1.29
RP1L1Q8IWN7 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms