Protein–RNA interactions for Protein: Q6TDU7

CASC1, Protein CASC1, humanhuman

Predictions only

Length 716 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC1Q6TDU7 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
CASC1Q6TDU7 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC31.23■■■□□ 2.59
CASC1Q6TDU7 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC31.23■■■□□ 2.59
CASC1Q6TDU7 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
CASC1Q6TDU7 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
CASC1Q6TDU7 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
CASC1Q6TDU7 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC31.21■■■□□ 2.59
CASC1Q6TDU7 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC31.21■■■□□ 2.59
CASC1Q6TDU7 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC31.21■■■□□ 2.59
CASC1Q6TDU7 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
CASC1Q6TDU7 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
CASC1Q6TDU7 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
CASC1Q6TDU7 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
CASC1Q6TDU7 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
CASC1Q6TDU7 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC31.19■■■□□ 2.58
CASC1Q6TDU7 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC31.19■■■□□ 2.58
CASC1Q6TDU7 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC31.19■■■□□ 2.58
CASC1Q6TDU7 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC31.19■■■□□ 2.58
CASC1Q6TDU7 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
CASC1Q6TDU7 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
CASC1Q6TDU7 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC31.17■■■□□ 2.58
CASC1Q6TDU7 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC31.17■■■□□ 2.58
CASC1Q6TDU7 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC31.17■■■□□ 2.58
CASC1Q6TDU7 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC31.17■■■□□ 2.58
CASC1Q6TDU7 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC31.17■■■□□ 2.58
CASC1Q6TDU7 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC31.17■■■□□ 2.58
CASC1Q6TDU7 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
CASC1Q6TDU7 AC108673.1-201ENST00000510422 1159 ntBASIC31.16■■■□□ 2.58
CASC1Q6TDU7 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC31.16■■■□□ 2.58
CASC1Q6TDU7 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
CASC1Q6TDU7 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC31.16■■■□□ 2.58
CASC1Q6TDU7 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC31.15■■■□□ 2.58
CASC1Q6TDU7 AC100797.4-201ENST00000631653 1827 ntBASIC31.13■■■□□ 2.57
CASC1Q6TDU7 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
CASC1Q6TDU7 AP006261.1-201ENST00000584783 668 ntBASIC31.13■■■□□ 2.57
CASC1Q6TDU7 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
CASC1Q6TDU7 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
CASC1Q6TDU7 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC31.12■■■□□ 2.57
CASC1Q6TDU7 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC31.12■■■□□ 2.57
CASC1Q6TDU7 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC31.12■■■□□ 2.57
CASC1Q6TDU7 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
CASC1Q6TDU7 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
CASC1Q6TDU7 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC31.11■■■□□ 2.57
CASC1Q6TDU7 BX255925.1-201ENST00000566954 1854 ntBASIC31.11■■■□□ 2.57
CASC1Q6TDU7 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
CASC1Q6TDU7 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC31.1■■■□□ 2.57
CASC1Q6TDU7 MIR3665-201ENST00000578708 105 ntBASIC31.1■■■□□ 2.57
CASC1Q6TDU7 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC31.09■■■□□ 2.57
CASC1Q6TDU7 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
CASC1Q6TDU7 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC31.09■■■□□ 2.57
CASC1Q6TDU7 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
CASC1Q6TDU7 DUX4L28-201ENST00000623687 678 ntBASIC31.09■■■□□ 2.57
CASC1Q6TDU7 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
CASC1Q6TDU7 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
CASC1Q6TDU7 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
CASC1Q6TDU7 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
CASC1Q6TDU7 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC31.06■■■□□ 2.56
CASC1Q6TDU7 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC31.06■■■□□ 2.56
CASC1Q6TDU7 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC31.06■■■□□ 2.56
CASC1Q6TDU7 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
CASC1Q6TDU7 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
CASC1Q6TDU7 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC31.06■■■□□ 2.56
CASC1Q6TDU7 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC31.05■■■□□ 2.56
CASC1Q6TDU7 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
CASC1Q6TDU7 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
CASC1Q6TDU7 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC31.05■■■□□ 2.56
CASC1Q6TDU7 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
CASC1Q6TDU7 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
CASC1Q6TDU7 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
CASC1Q6TDU7 EI24-212ENST00000615917 1407 ntTSL 2 BASIC31.04■■■□□ 2.56
CASC1Q6TDU7 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC31.02■■■□□ 2.56
CASC1Q6TDU7 AL162393.1-201ENST00000437852 946 ntBASIC31.02■■■□□ 2.56
CASC1Q6TDU7 NRG1-221ENST00000614767 762 ntTSL 5 BASIC31.02■■■□□ 2.56
CASC1Q6TDU7 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC31.02■■■□□ 2.56
CASC1Q6TDU7 MEST-211ENST00000437945 1455 ntTSL 5 BASIC31.01■■■□□ 2.56
CASC1Q6TDU7 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC31.01■■■□□ 2.55
CASC1Q6TDU7 MIR6090-201ENST00000622481 60 ntBASIC31.01■■■□□ 2.55
CASC1Q6TDU7 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC31■■■□□ 2.55
CASC1Q6TDU7 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC31■■■□□ 2.55
CASC1Q6TDU7 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC31■■■□□ 2.55
CASC1Q6TDU7 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
CASC1Q6TDU7 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
CASC1Q6TDU7 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
CASC1Q6TDU7 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
CASC1Q6TDU7 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC30.99■■■□□ 2.55
CASC1Q6TDU7 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
CASC1Q6TDU7 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC30.98■■■□□ 2.55
CASC1Q6TDU7 LINC01003-201ENST00000564834 1764 ntBASIC30.98■■■□□ 2.55
CASC1Q6TDU7 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC30.98■■■□□ 2.55
CASC1Q6TDU7 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC30.98■■■□□ 2.55
CASC1Q6TDU7 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC30.98■■■□□ 2.55
CASC1Q6TDU7 AC135983.2-203ENST00000454486 1613 ntBASIC30.98■■■□□ 2.55
CASC1Q6TDU7 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
CASC1Q6TDU7 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC30.96■■■□□ 2.55
CASC1Q6TDU7 AP002414.2-202ENST00000590929 1450 ntBASIC30.96■■■□□ 2.55
CASC1Q6TDU7 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC30.96■■■□□ 2.55
CASC1Q6TDU7 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
CASC1Q6TDU7 AL121749.1-202ENST00000609313 2153 ntBASIC30.96■■■□□ 2.55
CASC1Q6TDU7 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
CASC1Q6TDU7 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.54
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms