Protein–RNA interactions for Protein: Q495D7

LINC01559, Putative uncharacterized protein encoded by LINC01559, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01559Q495D7 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LINC01559Q495D7 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
LINC01559Q495D7 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
LINC01559Q495D7 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
LINC01559Q495D7 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LINC01559Q495D7 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC18.98■□□□□ 0.63
LINC01559Q495D7 LINC01003-201ENST00000564834 1764 ntBASIC18.98■□□□□ 0.63
LINC01559Q495D7 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC18.98■□□□□ 0.63
LINC01559Q495D7 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
LINC01559Q495D7 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
LINC01559Q495D7 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
LINC01559Q495D7 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
LINC01559Q495D7 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC18.97■□□□□ 0.63
LINC01559Q495D7 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
LINC01559Q495D7 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LINC01559Q495D7 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LINC01559Q495D7 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LINC01559Q495D7 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
LINC01559Q495D7 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LINC01559Q495D7 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
LINC01559Q495D7 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
LINC01559Q495D7 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
LINC01559Q495D7 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
LINC01559Q495D7 AC135731.1-201ENST00000569415 2548 ntBASIC18.95■□□□□ 0.62
LINC01559Q495D7 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC18.95■□□□□ 0.62
LINC01559Q495D7 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC18.95■□□□□ 0.62
LINC01559Q495D7 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LINC01559Q495D7 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
LINC01559Q495D7 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
LINC01559Q495D7 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LINC01559Q495D7 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LINC01559Q495D7 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
LINC01559Q495D7 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LINC01559Q495D7 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
LINC01559Q495D7 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC18.93■□□□□ 0.62
LINC01559Q495D7 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LINC01559Q495D7 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC18.93■□□□□ 0.62
LINC01559Q495D7 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LINC01559Q495D7 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
LINC01559Q495D7 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
LINC01559Q495D7 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
LINC01559Q495D7 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
LINC01559Q495D7 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LINC01559Q495D7 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC18.92■□□□□ 0.62
LINC01559Q495D7 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC18.92■□□□□ 0.62
LINC01559Q495D7 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LINC01559Q495D7 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
LINC01559Q495D7 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LINC01559Q495D7 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
LINC01559Q495D7 AC127502.1-201ENST00000399971 1502 ntBASIC18.9■□□□□ 0.62
LINC01559Q495D7 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
LINC01559Q495D7 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC18.9■□□□□ 0.62
LINC01559Q495D7 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC18.9■□□□□ 0.62
LINC01559Q495D7 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC18.9■□□□□ 0.62
LINC01559Q495D7 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
LINC01559Q495D7 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
LINC01559Q495D7 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
LINC01559Q495D7 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
LINC01559Q495D7 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LINC01559Q495D7 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC18.89■□□□□ 0.61
LINC01559Q495D7 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
LINC01559Q495D7 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LINC01559Q495D7 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
LINC01559Q495D7 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LINC01559Q495D7 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LINC01559Q495D7 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
LINC01559Q495D7 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC18.86■□□□□ 0.61
LINC01559Q495D7 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LINC01559Q495D7 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LINC01559Q495D7 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LINC01559Q495D7 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LINC01559Q495D7 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LINC01559Q495D7 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LINC01559Q495D7 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC18.85■□□□□ 0.61
LINC01559Q495D7 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
LINC01559Q495D7 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
LINC01559Q495D7 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LINC01559Q495D7 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LINC01559Q495D7 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
LINC01559Q495D7 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC18.83■□□□□ 0.61
LINC01559Q495D7 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
LINC01559Q495D7 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LINC01559Q495D7 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
LINC01559Q495D7 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
LINC01559Q495D7 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LINC01559Q495D7 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
LINC01559Q495D7 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LINC01559Q495D7 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC18.82■□□□□ 0.6
LINC01559Q495D7 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LINC01559Q495D7 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC18.82■□□□□ 0.6
LINC01559Q495D7 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LINC01559Q495D7 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LINC01559Q495D7 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC18.82■□□□□ 0.6
LINC01559Q495D7 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
LINC01559Q495D7 AC100797.4-201ENST00000631653 1827 ntBASIC18.81■□□□□ 0.6
LINC01559Q495D7 DENR-202ENST00000455982 1052 ntTSL 5 BASIC18.8■□□□□ 0.6
LINC01559Q495D7 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC18.8■□□□□ 0.6
LINC01559Q495D7 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
LINC01559Q495D7 PKM-203ENST00000389093 2279 ntTSL 5 BASIC18.8■□□□□ 0.6
LINC01559Q495D7 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms