Protein–RNA interactions for Protein: Q02985

CFHR3, Complement factor H-related protein 3, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR3Q02985 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CFHR3Q02985 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CFHR3Q02985 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
CFHR3Q02985 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CFHR3Q02985 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CFHR3Q02985 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC20.14■□□□□ 0.81
CFHR3Q02985 CR559946.2-201ENST00000623684 991 ntBASIC20.14■□□□□ 0.81
CFHR3Q02985 CHML-204ENST00000638121 920 ntTSL 2 BASIC20.14■□□□□ 0.81
CFHR3Q02985 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CFHR3Q02985 MIR3648-2-201ENST00000581792 180 ntBASIC20.13■□□□□ 0.81
CFHR3Q02985 MIR3648-1-201ENST00000615959 180 ntBASIC20.13■□□□□ 0.81
CFHR3Q02985 AL139393.2-201ENST00000608721 2025 ntBASIC20.13■□□□□ 0.81
CFHR3Q02985 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CFHR3Q02985 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
CFHR3Q02985 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CFHR3Q02985 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC20.12■□□□□ 0.81
CFHR3Q02985 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
CFHR3Q02985 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CFHR3Q02985 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CFHR3Q02985 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
CFHR3Q02985 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CFHR3Q02985 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC20.11■□□□□ 0.81
CFHR3Q02985 GDI1-215ENST00000630693 786 ntTSL 4 BASIC20.11■□□□□ 0.81
CFHR3Q02985 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CFHR3Q02985 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
CFHR3Q02985 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CFHR3Q02985 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CFHR3Q02985 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC20.1■□□□□ 0.81
CFHR3Q02985 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC20.1■□□□□ 0.81
CFHR3Q02985 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CFHR3Q02985 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
CFHR3Q02985 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC20.1■□□□□ 0.81
CFHR3Q02985 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CFHR3Q02985 MEST-211ENST00000437945 1455 ntTSL 5 BASIC20.09■□□□□ 0.81
CFHR3Q02985 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC20.08■□□□□ 0.81
CFHR3Q02985 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC20.08■□□□□ 0.81
CFHR3Q02985 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CFHR3Q02985 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC20.07■□□□□ 0.8
CFHR3Q02985 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC20.07■□□□□ 0.8
CFHR3Q02985 AC016575.1-201ENST00000607026 382 ntBASIC20.07■□□□□ 0.8
CFHR3Q02985 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CFHR3Q02985 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC20.06■□□□□ 0.8
CFHR3Q02985 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CFHR3Q02985 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CFHR3Q02985 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CFHR3Q02985 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC20.06■□□□□ 0.8
CFHR3Q02985 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CFHR3Q02985 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC20.05■□□□□ 0.8
CFHR3Q02985 MBP-237ENST00000579129 1052 ntTSL 5 BASIC20.05■□□□□ 0.8
CFHR3Q02985 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CFHR3Q02985 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC20.05■□□□□ 0.8
CFHR3Q02985 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC20.04■□□□□ 0.8
CFHR3Q02985 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CFHR3Q02985 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CFHR3Q02985 MIR639-201ENST00000384974 98 ntBASIC20.04■□□□□ 0.8
CFHR3Q02985 HES6-205ENST00000409356 528 ntTSL 2 BASIC20.04■□□□□ 0.8
CFHR3Q02985 HLA-V-202ENST00000446817 847 ntBASIC20.04■□□□□ 0.8
CFHR3Q02985 RPS2-202ENST00000526522 924 ntTSL 2 BASIC20.04■□□□□ 0.8
CFHR3Q02985 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CFHR3Q02985 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC20.04■□□□□ 0.8
CFHR3Q02985 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC20.03■□□□□ 0.8
CFHR3Q02985 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CFHR3Q02985 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CFHR3Q02985 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CFHR3Q02985 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CFHR3Q02985 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CFHR3Q02985 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC20.02■□□□□ 0.8
CFHR3Q02985 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CFHR3Q02985 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
CFHR3Q02985 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC20.01■□□□□ 0.79
CFHR3Q02985 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC20.01■□□□□ 0.79
CFHR3Q02985 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CFHR3Q02985 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC20■□□□□ 0.79
CFHR3Q02985 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
CFHR3Q02985 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC20■□□□□ 0.79
CFHR3Q02985 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
CFHR3Q02985 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
CFHR3Q02985 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CFHR3Q02985 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC19.99■□□□□ 0.79
CFHR3Q02985 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CFHR3Q02985 AC110285.7-201ENST00000624417 1536 ntBASIC19.98■□□□□ 0.79
CFHR3Q02985 AC100797.4-201ENST00000631653 1827 ntBASIC19.98■□□□□ 0.79
CFHR3Q02985 CHST11-202ENST00000546689 756 ntTSL 2 BASIC19.98■□□□□ 0.79
CFHR3Q02985 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CFHR3Q02985 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CFHR3Q02985 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CFHR3Q02985 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
CFHR3Q02985 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CFHR3Q02985 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CFHR3Q02985 ABCB10P3-201ENST00000561950 2166 ntBASIC19.96■□□□□ 0.79
CFHR3Q02985 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CFHR3Q02985 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC19.96■□□□□ 0.79
CFHR3Q02985 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC19.95■□□□□ 0.78
CFHR3Q02985 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CFHR3Q02985 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC19.95■□□□□ 0.78
CFHR3Q02985 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CFHR3Q02985 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC19.95■□□□□ 0.78
CFHR3Q02985 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
CFHR3Q02985 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC19.95■□□□□ 0.78
CFHR3Q02985 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms