Protein–RNA interactions for Protein: P54278

PMS2, Mismatch repair endonuclease PMS2, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P54278 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
PMS2P54278 SHF-208ENST00000560734 1731 ntTSL 3 BASIC26.36■■□□□ 1.81
PMS2P54278 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
PMS2P54278 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC26.36■■□□□ 1.81
PMS2P54278 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
PMS2P54278 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC26.35■■□□□ 1.81
PMS2P54278 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
PMS2P54278 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC26.34■■□□□ 1.81
PMS2P54278 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC26.34■■□□□ 1.81
PMS2P54278 AP004833.2-201ENST00000532228 1454 ntBASIC26.34■■□□□ 1.81
PMS2P54278 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
PMS2P54278 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC26.34■■□□□ 1.81
PMS2P54278 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
PMS2P54278 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
PMS2P54278 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC26.33■■□□□ 1.81
PMS2P54278 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC26.33■■□□□ 1.81
PMS2P54278 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC26.33■■□□□ 1.81
PMS2P54278 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC26.33■■□□□ 1.8
PMS2P54278 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC26.32■■□□□ 1.8
PMS2P54278 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC26.31■■□□□ 1.8
PMS2P54278 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
PMS2P54278 AC135731.1-201ENST00000569415 2548 ntBASIC26.31■■□□□ 1.8
PMS2P54278 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
PMS2P54278 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC26.31■■□□□ 1.8
PMS2P54278 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
PMS2P54278 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC26.31■■□□□ 1.8
PMS2P54278 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC26.3■■□□□ 1.8
PMS2P54278 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
PMS2P54278 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
PMS2P54278 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
PMS2P54278 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
PMS2P54278 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC26.28■■□□□ 1.8
PMS2P54278 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
PMS2P54278 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
PMS2P54278 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC26.27■■□□□ 1.8
PMS2P54278 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
PMS2P54278 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
PMS2P54278 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC26.27■■□□□ 1.8
PMS2P54278 LINC01003-201ENST00000564834 1764 ntBASIC26.27■■□□□ 1.8
PMS2P54278 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC26.26■■□□□ 1.79
PMS2P54278 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
PMS2P54278 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC26.26■■□□□ 1.79
PMS2P54278 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC26.25■■□□□ 1.79
PMS2P54278 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
PMS2P54278 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC26.25■■□□□ 1.79
PMS2P54278 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC26.25■■□□□ 1.79
PMS2P54278 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
PMS2P54278 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC26.25■■□□□ 1.79
PMS2P54278 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
PMS2P54278 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC26.24■■□□□ 1.79
PMS2P54278 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
PMS2P54278 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
PMS2P54278 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC26.24■■□□□ 1.79
PMS2P54278 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC26.24■■□□□ 1.79
PMS2P54278 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
PMS2P54278 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
PMS2P54278 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC26.22■■□□□ 1.79
PMS2P54278 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC26.22■■□□□ 1.79
PMS2P54278 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
PMS2P54278 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC26.22■■□□□ 1.79
PMS2P54278 CAHM-201ENST00000604200 896 ntBASIC26.22■■□□□ 1.79
PMS2P54278 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC26.22■■□□□ 1.79
PMS2P54278 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC26.22■■□□□ 1.79
PMS2P54278 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC26.22■■□□□ 1.79
PMS2P54278 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
PMS2P54278 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
PMS2P54278 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
PMS2P54278 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC26.21■■□□□ 1.79
PMS2P54278 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.78
PMS2P54278 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
PMS2P54278 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC26.2■■□□□ 1.78
PMS2P54278 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
PMS2P54278 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
PMS2P54278 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
PMS2P54278 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
PMS2P54278 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
PMS2P54278 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC26.19■■□□□ 1.78
PMS2P54278 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
PMS2P54278 PKM-203ENST00000389093 2279 ntTSL 5 BASIC26.17■■□□□ 1.78
PMS2P54278 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
PMS2P54278 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC26.17■■□□□ 1.78
PMS2P54278 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC26.17■■□□□ 1.78
PMS2P54278 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC26.17■■□□□ 1.78
PMS2P54278 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC26.16■■□□□ 1.78
PMS2P54278 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
PMS2P54278 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
PMS2P54278 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC26.15■■□□□ 1.78
PMS2P54278 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC26.14■■□□□ 1.78
PMS2P54278 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC26.14■■□□□ 1.78
PMS2P54278 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC26.14■■□□□ 1.77
PMS2P54278 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
PMS2P54278 AC127502.1-201ENST00000399971 1502 ntBASIC26.13■■□□□ 1.77
PMS2P54278 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC26.13■■□□□ 1.77
PMS2P54278 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC26.12■■□□□ 1.77
PMS2P54278 AL449106.1-201ENST00000608517 1980 ntBASIC26.12■■□□□ 1.77
PMS2P54278 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC26.12■■□□□ 1.77
PMS2P54278 AL391121.1-201ENST00000607967 1349 ntBASIC26.12■■□□□ 1.77
PMS2P54278 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC26.12■■□□□ 1.77
PMS2P54278 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
PMS2P54278 AP006261.1-201ENST00000584783 668 ntBASIC26.11■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 10.8 ms