Protein–RNA interactions for Protein: P21580

TNFAIP3, Tumor necrosis factor alpha-induced protein 3, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3P21580 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
TNFAIP3P21580 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC27.42■■□□□ 1.98
TNFAIP3P21580 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC27.42■■□□□ 1.98
TNFAIP3P21580 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
TNFAIP3P21580 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC27.41■■□□□ 1.98
TNFAIP3P21580 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
TNFAIP3P21580 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
TNFAIP3P21580 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
TNFAIP3P21580 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
TNFAIP3P21580 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
TNFAIP3P21580 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
TNFAIP3P21580 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC27.4■■□□□ 1.98
TNFAIP3P21580 AC108673.1-201ENST00000510422 1159 ntBASIC27.4■■□□□ 1.98
TNFAIP3P21580 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC27.4■■□□□ 1.98
TNFAIP3P21580 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC27.4■■□□□ 1.98
TNFAIP3P21580 PROC-203ENST00000409048 1586 ntTSL 5 BASIC27.39■■□□□ 1.98
TNFAIP3P21580 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
TNFAIP3P21580 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
TNFAIP3P21580 DUX4L28-201ENST00000623687 678 ntBASIC27.39■■□□□ 1.98
TNFAIP3P21580 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.97
TNFAIP3P21580 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC27.38■■□□□ 1.97
TNFAIP3P21580 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
TNFAIP3P21580 AC100797.4-201ENST00000631653 1827 ntBASIC27.38■■□□□ 1.97
TNFAIP3P21580 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
TNFAIP3P21580 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
TNFAIP3P21580 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC27.37■■□□□ 1.97
TNFAIP3P21580 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
TNFAIP3P21580 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC27.37■■□□□ 1.97
TNFAIP3P21580 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC27.37■■□□□ 1.97
TNFAIP3P21580 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
TNFAIP3P21580 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC27.35■■□□□ 1.97
TNFAIP3P21580 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
TNFAIP3P21580 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC27.35■■□□□ 1.97
TNFAIP3P21580 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC27.35■■□□□ 1.97
TNFAIP3P21580 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC27.34■■□□□ 1.97
TNFAIP3P21580 MIR3665-201ENST00000578708 105 ntBASIC27.34■■□□□ 1.97
TNFAIP3P21580 MIR6090-201ENST00000622481 60 ntBASIC27.34■■□□□ 1.97
TNFAIP3P21580 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC27.33■■□□□ 1.97
TNFAIP3P21580 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
TNFAIP3P21580 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
TNFAIP3P21580 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
TNFAIP3P21580 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
TNFAIP3P21580 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
TNFAIP3P21580 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC27.32■■□□□ 1.96
TNFAIP3P21580 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC27.32■■□□□ 1.96
TNFAIP3P21580 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
TNFAIP3P21580 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
TNFAIP3P21580 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
TNFAIP3P21580 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC27.31■■□□□ 1.96
TNFAIP3P21580 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC27.3■■□□□ 1.96
TNFAIP3P21580 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
TNFAIP3P21580 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC27.3■■□□□ 1.96
TNFAIP3P21580 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC27.29■■□□□ 1.96
TNFAIP3P21580 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC27.29■■□□□ 1.96
TNFAIP3P21580 BX255925.1-201ENST00000566954 1854 ntBASIC27.28■■□□□ 1.96
TNFAIP3P21580 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC27.27■■□□□ 1.96
TNFAIP3P21580 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC27.27■■□□□ 1.96
TNFAIP3P21580 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
TNFAIP3P21580 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.96
TNFAIP3P21580 EI24-212ENST00000615917 1407 ntTSL 2 BASIC27.26■■□□□ 1.95
TNFAIP3P21580 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC27.26■■□□□ 1.95
TNFAIP3P21580 AP006261.1-201ENST00000584783 668 ntBASIC27.26■■□□□ 1.95
TNFAIP3P21580 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
TNFAIP3P21580 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC27.25■■□□□ 1.95
TNFAIP3P21580 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
TNFAIP3P21580 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
TNFAIP3P21580 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC27.25■■□□□ 1.95
TNFAIP3P21580 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC27.25■■□□□ 1.95
TNFAIP3P21580 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC27.24■■□□□ 1.95
TNFAIP3P21580 AC135983.2-203ENST00000454486 1613 ntBASIC27.24■■□□□ 1.95
TNFAIP3P21580 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
TNFAIP3P21580 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
TNFAIP3P21580 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC27.24■■□□□ 1.95
TNFAIP3P21580 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC27.24■■□□□ 1.95
TNFAIP3P21580 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC27.24■■□□□ 1.95
TNFAIP3P21580 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC27.24■■□□□ 1.95
TNFAIP3P21580 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC27.23■■□□□ 1.95
TNFAIP3P21580 MEST-211ENST00000437945 1455 ntTSL 5 BASIC27.22■■□□□ 1.95
TNFAIP3P21580 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
TNFAIP3P21580 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC27.21■■□□□ 1.95
TNFAIP3P21580 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC27.21■■□□□ 1.95
TNFAIP3P21580 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC27.21■■□□□ 1.95
TNFAIP3P21580 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC27.21■■□□□ 1.95
TNFAIP3P21580 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
TNFAIP3P21580 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC27.2■■□□□ 1.94
TNFAIP3P21580 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC27.2■■□□□ 1.94
TNFAIP3P21580 AP002414.2-202ENST00000590929 1450 ntBASIC27.19■■□□□ 1.94
TNFAIP3P21580 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC27.19■■□□□ 1.94
TNFAIP3P21580 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC27.19■■□□□ 1.94
TNFAIP3P21580 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
TNFAIP3P21580 WHAMMP2-203ENST00000563942 1603 ntBASIC27.19■■□□□ 1.94
TNFAIP3P21580 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
TNFAIP3P21580 LINC01003-201ENST00000564834 1764 ntBASIC27.18■■□□□ 1.94
TNFAIP3P21580 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
TNFAIP3P21580 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC27.18■■□□□ 1.94
TNFAIP3P21580 AL121749.1-202ENST00000609313 2153 ntBASIC27.18■■□□□ 1.94
TNFAIP3P21580 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
TNFAIP3P21580 LINC00273-201ENST00000539813 1452 ntBASIC27.17■■□□□ 1.94
TNFAIP3P21580 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC27.16■■□□□ 1.94
TNFAIP3P21580 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC27.16■■□□□ 1.94
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms