Protein–RNA interactions for Protein: P04818

TYMS, Thymidylate synthase, humanhuman

Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TYMSP04818 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TYMSP04818 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TYMSP04818 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TYMSP04818 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
TYMSP04818 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
TYMSP04818 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TYMSP04818 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC19.64■□□□□ 0.74
TYMSP04818 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
TYMSP04818 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
TYMSP04818 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
TYMSP04818 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC19.64■□□□□ 0.73
TYMSP04818 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TYMSP04818 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
TYMSP04818 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
TYMSP04818 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC19.63■□□□□ 0.73
TYMSP04818 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
TYMSP04818 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TYMSP04818 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
TYMSP04818 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
TYMSP04818 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
TYMSP04818 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
TYMSP04818 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TYMSP04818 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
TYMSP04818 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
TYMSP04818 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC19.61■□□□□ 0.73
TYMSP04818 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
TYMSP04818 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TYMSP04818 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TYMSP04818 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TYMSP04818 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TYMSP04818 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC19.6■□□□□ 0.73
TYMSP04818 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TYMSP04818 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
TYMSP04818 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TYMSP04818 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC19.6■□□□□ 0.73
TYMSP04818 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC19.6■□□□□ 0.73
TYMSP04818 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC19.6■□□□□ 0.73
TYMSP04818 AC020928.2-201ENST00000588717 2197 ntBASIC19.59■□□□□ 0.73
TYMSP04818 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
TYMSP04818 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
TYMSP04818 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TYMSP04818 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC19.58■□□□□ 0.73
TYMSP04818 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TYMSP04818 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
TYMSP04818 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
TYMSP04818 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
TYMSP04818 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TYMSP04818 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC19.56■□□□□ 0.72
TYMSP04818 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
TYMSP04818 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC19.56■□□□□ 0.72
TYMSP04818 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TYMSP04818 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TYMSP04818 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
TYMSP04818 AC091060.1-201ENST00000623524 1766 ntBASIC19.55■□□□□ 0.72
TYMSP04818 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TYMSP04818 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
TYMSP04818 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TYMSP04818 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TYMSP04818 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TYMSP04818 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC19.54■□□□□ 0.72
TYMSP04818 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TYMSP04818 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
TYMSP04818 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
TYMSP04818 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
TYMSP04818 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC19.53■□□□□ 0.72
TYMSP04818 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC19.53■□□□□ 0.72
TYMSP04818 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TYMSP04818 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC19.52■□□□□ 0.72
TYMSP04818 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC19.52■□□□□ 0.72
TYMSP04818 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC19.52■□□□□ 0.72
TYMSP04818 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TYMSP04818 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TYMSP04818 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC19.52■□□□□ 0.72
TYMSP04818 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC19.52■□□□□ 0.72
TYMSP04818 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TYMSP04818 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TYMSP04818 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
TYMSP04818 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
TYMSP04818 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TYMSP04818 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
TYMSP04818 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC19.5■□□□□ 0.71
TYMSP04818 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC19.5■□□□□ 0.71
TYMSP04818 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TYMSP04818 RARA-203ENST00000394086 2008 ntTSL 2 BASIC19.5■□□□□ 0.71
TYMSP04818 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TYMSP04818 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
TYMSP04818 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TYMSP04818 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TYMSP04818 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TYMSP04818 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
TYMSP04818 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TYMSP04818 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TYMSP04818 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
TYMSP04818 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC19.48■□□□□ 0.71
TYMSP04818 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
TYMSP04818 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TYMSP04818 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC19.48■□□□□ 0.71
TYMSP04818 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TYMSP04818 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TYMSP04818 PROC-203ENST00000409048 1586 ntTSL 5 BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms