Protein–RNA interactions for Protein: O95104

SCAF4, Splicing factor, arginine/serine-rich 15, humanhuman

Known RBP Predictions only

Length 1,147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4O95104 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SCAF4O95104 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
SCAF4O95104 AP004833.2-201ENST00000532228 1454 ntBASIC20.7■□□□□ 0.9
SCAF4O95104 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SCAF4O95104 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC20.7■□□□□ 0.9
SCAF4O95104 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
SCAF4O95104 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SCAF4O95104 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
SCAF4O95104 SHF-208ENST00000560734 1731 ntTSL 3 BASIC20.69■□□□□ 0.9
SCAF4O95104 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC20.69■□□□□ 0.9
SCAF4O95104 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SCAF4O95104 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
SCAF4O95104 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
SCAF4O95104 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SCAF4O95104 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC20.68■□□□□ 0.9
SCAF4O95104 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
SCAF4O95104 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
SCAF4O95104 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC20.67■□□□□ 0.9
SCAF4O95104 AL133380.1-201ENST00000506013 324 ntBASIC20.67■□□□□ 0.9
SCAF4O95104 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC20.67■□□□□ 0.9
SCAF4O95104 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC20.67■□□□□ 0.9
SCAF4O95104 AC010864.1-201ENST00000609407 1511 ntBASIC20.67■□□□□ 0.9
SCAF4O95104 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC20.67■□□□□ 0.9
SCAF4O95104 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
SCAF4O95104 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SCAF4O95104 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC20.66■□□□□ 0.9
SCAF4O95104 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SCAF4O95104 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC20.65■□□□□ 0.9
SCAF4O95104 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SCAF4O95104 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
SCAF4O95104 AC136428.2-201ENST00000563187 214 ntBASIC20.65■□□□□ 0.9
SCAF4O95104 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SCAF4O95104 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
SCAF4O95104 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC20.64■□□□□ 0.9
SCAF4O95104 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
SCAF4O95104 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SCAF4O95104 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SCAF4O95104 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SCAF4O95104 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SCAF4O95104 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SCAF4O95104 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC20.63■□□□□ 0.89
SCAF4O95104 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
SCAF4O95104 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
SCAF4O95104 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SCAF4O95104 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SCAF4O95104 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SCAF4O95104 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SCAF4O95104 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC20.62■□□□□ 0.89
SCAF4O95104 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SCAF4O95104 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC20.62■□□□□ 0.89
SCAF4O95104 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SCAF4O95104 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SCAF4O95104 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
SCAF4O95104 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC20.61■□□□□ 0.89
SCAF4O95104 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SCAF4O95104 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SCAF4O95104 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SCAF4O95104 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SCAF4O95104 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SCAF4O95104 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
SCAF4O95104 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SCAF4O95104 PKM-204ENST00000449901 2526 ntTSL 2 BASIC20.59■□□□□ 0.89
SCAF4O95104 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC20.59■□□□□ 0.89
SCAF4O95104 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SCAF4O95104 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SCAF4O95104 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC20.59■□□□□ 0.89
SCAF4O95104 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SCAF4O95104 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SCAF4O95104 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
SCAF4O95104 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
SCAF4O95104 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SCAF4O95104 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SCAF4O95104 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
SCAF4O95104 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SCAF4O95104 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC20.57■□□□□ 0.88
SCAF4O95104 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
SCAF4O95104 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SCAF4O95104 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SCAF4O95104 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
SCAF4O95104 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC20.56■□□□□ 0.88
SCAF4O95104 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
SCAF4O95104 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
SCAF4O95104 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SCAF4O95104 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SCAF4O95104 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SCAF4O95104 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC20.54■□□□□ 0.88
SCAF4O95104 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SCAF4O95104 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SCAF4O95104 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SCAF4O95104 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC20.54■□□□□ 0.88
SCAF4O95104 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SCAF4O95104 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
SCAF4O95104 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SCAF4O95104 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
SCAF4O95104 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SCAF4O95104 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SCAF4O95104 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SCAF4O95104 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC20.52■□□□□ 0.88
SCAF4O95104 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
SCAF4O95104 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms