Protein–RNA interactions for Protein: O75954

TSPAN9, Tetraspanin-9, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9O75954 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC21.6■■□□□ 1.05
TSPAN9O75954 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
TSPAN9O75954 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC21.59■■□□□ 1.05
TSPAN9O75954 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC21.59■■□□□ 1.05
TSPAN9O75954 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC21.58■■□□□ 1.05
TSPAN9O75954 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
TSPAN9O75954 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
TSPAN9O75954 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
TSPAN9O75954 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TSPAN9O75954 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TSPAN9O75954 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TSPAN9O75954 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
TSPAN9O75954 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TSPAN9O75954 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
TSPAN9O75954 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TSPAN9O75954 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TSPAN9O75954 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
TSPAN9O75954 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TSPAN9O75954 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC21.54■■□□□ 1.04
TSPAN9O75954 MLEC-202ENST00000412616 841 ntTSL 3 BASIC21.54■■□□□ 1.04
TSPAN9O75954 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TSPAN9O75954 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
TSPAN9O75954 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
TSPAN9O75954 ABHD17AP4-201ENST00000411545 909 ntBASIC21.52■■□□□ 1.04
TSPAN9O75954 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TSPAN9O75954 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC21.51■■□□□ 1.03
TSPAN9O75954 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC21.51■■□□□ 1.03
TSPAN9O75954 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TSPAN9O75954 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TSPAN9O75954 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TSPAN9O75954 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TSPAN9O75954 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
TSPAN9O75954 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TSPAN9O75954 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TSPAN9O75954 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TSPAN9O75954 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
TSPAN9O75954 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
TSPAN9O75954 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
TSPAN9O75954 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TSPAN9O75954 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.48■■□□□ 1.03
TSPAN9O75954 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC21.48■■□□□ 1.03
TSPAN9O75954 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC21.48■■□□□ 1.03
TSPAN9O75954 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TSPAN9O75954 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC21.48■■□□□ 1.03
TSPAN9O75954 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC21.48■■□□□ 1.03
TSPAN9O75954 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC21.48■■□□□ 1.03
TSPAN9O75954 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.47■■□□□ 1.03
TSPAN9O75954 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TSPAN9O75954 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TSPAN9O75954 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
TSPAN9O75954 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
TSPAN9O75954 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC21.46■■□□□ 1.03
TSPAN9O75954 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
TSPAN9O75954 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC21.46■■□□□ 1.03
TSPAN9O75954 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC21.45■■□□□ 1.02
TSPAN9O75954 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TSPAN9O75954 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC21.45■■□□□ 1.02
TSPAN9O75954 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
TSPAN9O75954 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
TSPAN9O75954 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
TSPAN9O75954 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
TSPAN9O75954 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TSPAN9O75954 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC21.44■■□□□ 1.02
TSPAN9O75954 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
TSPAN9O75954 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TSPAN9O75954 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
TSPAN9O75954 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TSPAN9O75954 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
TSPAN9O75954 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC21.43■■□□□ 1.02
TSPAN9O75954 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TSPAN9O75954 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
TSPAN9O75954 BOD1-206ENST00000480951 814 ntTSL 2 BASIC21.43■■□□□ 1.02
TSPAN9O75954 MIR7108-201ENST00000614319 87 ntBASIC21.43■■□□□ 1.02
TSPAN9O75954 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
TSPAN9O75954 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC21.43■■□□□ 1.02
TSPAN9O75954 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TSPAN9O75954 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TSPAN9O75954 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
TSPAN9O75954 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
TSPAN9O75954 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
TSPAN9O75954 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.41■■□□□ 1.02
TSPAN9O75954 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TSPAN9O75954 RPS2-209ENST00000529806 993 ntTSL 3 BASIC21.41■■□□□ 1.02
TSPAN9O75954 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TSPAN9O75954 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TSPAN9O75954 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
TSPAN9O75954 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TSPAN9O75954 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
TSPAN9O75954 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TSPAN9O75954 RARA-203ENST00000394086 2008 ntTSL 2 BASIC21.4■■□□□ 1.02
TSPAN9O75954 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
TSPAN9O75954 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TSPAN9O75954 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TSPAN9O75954 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
TSPAN9O75954 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC21.4■■□□□ 1.02
TSPAN9O75954 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
TSPAN9O75954 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
TSPAN9O75954 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC21.39■■□□□ 1.02
TSPAN9O75954 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
TSPAN9O75954 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms