Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NDUFA1O15239 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NDUFA1O15239 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NDUFA1O15239 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NDUFA1O15239 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NDUFA1O15239 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NDUFA1O15239 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NDUFA1O15239 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NDUFA1O15239 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC17.4■□□□□ 0.38
NDUFA1O15239 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NDUFA1O15239 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NDUFA1O15239 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC17.4■□□□□ 0.38
NDUFA1O15239 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
NDUFA1O15239 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC17.39■□□□□ 0.37
NDUFA1O15239 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC17.39■□□□□ 0.37
NDUFA1O15239 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC17.39■□□□□ 0.37
NDUFA1O15239 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
NDUFA1O15239 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NDUFA1O15239 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NDUFA1O15239 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NDUFA1O15239 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NDUFA1O15239 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NDUFA1O15239 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC17.38■□□□□ 0.37
NDUFA1O15239 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NDUFA1O15239 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC17.37■□□□□ 0.37
NDUFA1O15239 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
NDUFA1O15239 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
NDUFA1O15239 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC17.37■□□□□ 0.37
NDUFA1O15239 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NDUFA1O15239 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NDUFA1O15239 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NDUFA1O15239 AL449106.1-201ENST00000608517 1980 ntBASIC17.37■□□□□ 0.37
NDUFA1O15239 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NDUFA1O15239 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
NDUFA1O15239 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC17.36■□□□□ 0.37
NDUFA1O15239 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC17.36■□□□□ 0.37
NDUFA1O15239 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC17.36■□□□□ 0.37
NDUFA1O15239 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
NDUFA1O15239 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NDUFA1O15239 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
NDUFA1O15239 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
NDUFA1O15239 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
NDUFA1O15239 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC17.35■□□□□ 0.37
NDUFA1O15239 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NDUFA1O15239 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NDUFA1O15239 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
NDUFA1O15239 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NDUFA1O15239 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC17.35■□□□□ 0.37
NDUFA1O15239 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
NDUFA1O15239 RARRES2P7-201ENST00000567349 469 ntBASIC17.34■□□□□ 0.37
NDUFA1O15239 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NDUFA1O15239 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
NDUFA1O15239 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.37
NDUFA1O15239 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC17.33■□□□□ 0.37
NDUFA1O15239 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
NDUFA1O15239 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NDUFA1O15239 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NDUFA1O15239 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NDUFA1O15239 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NDUFA1O15239 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
NDUFA1O15239 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NDUFA1O15239 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NDUFA1O15239 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
NDUFA1O15239 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
NDUFA1O15239 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC17.32■□□□□ 0.36
NDUFA1O15239 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NDUFA1O15239 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC17.31■□□□□ 0.36
NDUFA1O15239 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NDUFA1O15239 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC17.31■□□□□ 0.36
NDUFA1O15239 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NDUFA1O15239 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NDUFA1O15239 AC010864.1-201ENST00000609407 1511 ntBASIC17.31■□□□□ 0.36
NDUFA1O15239 LINC01003-201ENST00000564834 1764 ntBASIC17.3■□□□□ 0.36
NDUFA1O15239 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC17.3■□□□□ 0.36
NDUFA1O15239 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC17.3■□□□□ 0.36
NDUFA1O15239 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC17.3■□□□□ 0.36
NDUFA1O15239 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC17.3■□□□□ 0.36
NDUFA1O15239 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
NDUFA1O15239 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NDUFA1O15239 AP004833.2-201ENST00000532228 1454 ntBASIC17.29■□□□□ 0.36
NDUFA1O15239 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC17.28■□□□□ 0.36
NDUFA1O15239 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NDUFA1O15239 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NDUFA1O15239 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NDUFA1O15239 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NDUFA1O15239 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NDUFA1O15239 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC17.28■□□□□ 0.36
NDUFA1O15239 SETD8P1-201ENST00000623146 1180 ntBASIC17.28■□□□□ 0.36
NDUFA1O15239 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NDUFA1O15239 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NDUFA1O15239 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
NDUFA1O15239 PKM-203ENST00000389093 2279 ntTSL 5 BASIC17.27■□□□□ 0.35
NDUFA1O15239 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
NDUFA1O15239 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
NDUFA1O15239 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NDUFA1O15239 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
NDUFA1O15239 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NDUFA1O15239 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
NDUFA1O15239 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NDUFA1O15239 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms