Protein–RNA interactions for Protein: O15226

NKRF, NF-kappa-B-repressing factor, humanhuman

Known RBP eCLIP

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKRFO15226 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.23e-7■■■■□ 24.1
NKRFO15226 FTX-209ENST00000602812 2356 ntTSL 1 (best)11.79□□□□□ -0.526e-7■■■■□ 24.1
NKRFO15226 SDCBP-212ENST00000523483 3589 ntTSL 2 BASIC10.34□□□□□ -0.753e-7■■■■□ 24.1
NKRFO15226 FTX-215ENST00000638681 9771 ntTSL 5 BASIC9.53□□□□□ -0.886e-7■■■■□ 24.1
NKRFO15226 SDCBP-206ENST00000519115 812 ntTSL 28.63□□□□□ -1.033e-7■■■■□ 24.1
NKRFO15226 SDCBP-210ENST00000522843 764 ntTSL 27.82□□□□□ -1.163e-7■■■■□ 24.1
NKRFO15226 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC7.56□□□□□ -1.23e-7■■■■□ 24.1
NKRFO15226 FTX-206ENST00000602420 751 ntTSL 36.62□□□□□ -1.356e-7■■■■□ 24.1
NKRFO15226 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC5.85□□□□□ -1.473e-7■■■■□ 24.1
NKRFO15226 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.562e-6■■■■□ 24
NKRFO15226 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC16.39■□□□□ 0.212e-6■■■■□ 24
NKRFO15226 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.092e-6■■■■□ 24
NKRFO15226 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC20.44■□□□□ 0.868e-10■■■■□ 23.8
NKRFO15226 SLC9A3R1-203ENST00000578958 714 ntTSL 220.44■□□□□ 0.868e-10■■■■□ 23.8
NKRFO15226 SLC9A3R1-204ENST00000581356 519 ntTSL 314.67□□□□□ -0.068e-10■■■■□ 23.8
NKRFO15226 DAZAP1-208ENST00000589874 3642 nt15.19■□□□□ 0.021e-7■■■■□ 23.8
NKRFO15226 DAZAP1-203ENST00000585485 3943 ntTSL 213.64□□□□□ -0.231e-7■■■■□ 23.8
NKRFO15226 DHRSX-207ENST00000478825 679 ntTSL 226.29■■□□□ 1.81e-6■■■■□ 23.8
NKRFO15226 DHRSX-203ENST00000430536 490 ntTSL 224.89■■□□□ 1.581e-6■■■■□ 23.8
NKRFO15226 DHRSX-202ENST00000412516 744 ntTSL 224.03■■□□□ 1.441e-6■■■■□ 23.8
NKRFO15226 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.011e-6■■■■□ 23.8
NKRFO15226 DHRSX-205ENST00000444280 797 ntTSL 219.93■□□□□ 0.781e-6■■■■□ 23.8
NKRFO15226 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.291e-6■■■■□ 23.8
NKRFO15226 ZBED1-204ENST00000461691 947 ntTSL 216.32■□□□□ 0.21e-6■■■■□ 23.8
NKRFO15226 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.131e-6■■■■□ 23.8
NKRFO15226 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.041e-6■■■■□ 23.8
NKRFO15226 DHRSX-204ENST00000441131 539 ntTSL 28.79□□□□□ -11e-6■■■■□ 23.8
NKRFO15226 SYNJ2-203ENST00000367113 939 ntTSL 29.12□□□□□ -0.951e-6■■■■□ 23.8
NKRFO15226 TBKBP1-202ENST00000537587 705 ntTSL 315.32■□□□□ 0.043e-13■■■■□ 23.7
NKRFO15226 PRNP-204ENST00000457586 855 ntTSL 1 (best)27.35■■□□□ 1.972e-11■■■■□ 23.7
NKRFO15226 PRNP-202ENST00000424424 806 ntTSL 1 (best)21.55■■□□□ 1.042e-11■■■■□ 23.7
NKRFO15226 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.252e-11■■■■□ 23.7
NKRFO15226 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.22e-11■■■■□ 23.7
NKRFO15226 FXR1-221ENST00000491674 365 ntTSL 2 BASIC18.11■□□□□ 0.492e-6■■■■□ 23.6
NKRFO15226 FXR1-209ENST00000472339 2130 ntTSL 516.46■□□□□ 0.232e-6■■■■□ 23.6
NKRFO15226 FXR1-220ENST00000491062 1768 ntTSL 2 BASIC13.59□□□□□ -0.232e-6■■■■□ 23.6
NKRFO15226 FXR1-208ENST00000469882 570 ntTSL 313.07□□□□□ -0.322e-6■■■■□ 23.6
NKRFO15226 FXR1-211ENST00000475315 2341 ntTSL 212.92□□□□□ -0.342e-6■■■■□ 23.6
NKRFO15226 FXR1-201ENST00000305586 3277 ntTSL 5 BASIC12.58□□□□□ -0.42e-6■■■■□ 23.6
NKRFO15226 FXR1-213ENST00000479176 541 ntTSL 212.19□□□□□ -0.462e-6■■■■□ 23.6
NKRFO15226 FXR1-207ENST00000468861 1989 ntTSL 2 BASIC11.79□□□□□ -0.522e-6■■■■□ 23.6
NKRFO15226 FXR1-206ENST00000465551 572 ntTSL 410.64□□□□□ -0.712e-6■■■■□ 23.6
NKRFO15226 FXR1-202ENST00000357559 8711 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.732e-6■■■■□ 23.6
NKRFO15226 FXR1-203ENST00000445140 2651 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.812e-6■■■■□ 23.6
NKRFO15226 FXR1-218ENST00000484790 571 ntTSL 48.69□□□□□ -1.022e-6■■■■□ 23.6
NKRFO15226 FXR1-219ENST00000484958 824 ntTSL 38.41□□□□□ -1.062e-6■■■■□ 23.6
NKRFO15226 TPT1-AS1-204ENST00000434849 2369 ntTSL 215.77■□□□□ 0.124e-7■■■■□ 23.6
NKRFO15226 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC5.85□□□□□ -1.474e-7■■■■□ 23.6
NKRFO15226 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 13e-6■■■■□ 23.6
NKRFO15226 MEGF6-205ENST00000485002 4705 ntTSL 515.91■□□□□ 0.143e-6■■■■□ 23.6
NKRFO15226 UBE2E1-208ENST00000481622 432 ntTSL 522.03■■□□□ 1.128e-9■■■■□ 23.4
NKRFO15226 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 18e-9■■■■□ 23.4
NKRFO15226 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC20.71■□□□□ 0.918e-9■■■■□ 23.4
NKRFO15226 UBE2E1-211ENST00000495141 582 ntTSL 218.47■□□□□ 0.558e-9■■■■□ 23.4
NKRFO15226 UBE2E1-209ENST00000484048 786 ntTSL 318.07■□□□□ 0.488e-9■■■■□ 23.4
NKRFO15226 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC27.29■■□□□ 1.961e-7■■■■□ 23.4
NKRFO15226 DNMT3A-202ENST00000321117 4279 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.241e-7■■■■□ 23.4
NKRFO15226 DNMT3A-204ENST00000380756 4477 ntTSL 1 (best)13.09□□□□□ -0.311e-7■■■■□ 23.4
NKRFO15226 DNMT3A-201ENST00000264709 9501 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.551e-7■■■■□ 23.4
NKRFO15226 BID-214ENST00000617586 542 ntTSL 5 BASIC24.5■■□□□ 1.519e-8■■■■□ 23.4
NKRFO15226 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC23.93■■□□□ 1.429e-8■■■■□ 23.4
NKRFO15226 BID-212ENST00000614949 1988 ntTSL 5 BASIC23.67■■□□□ 1.389e-8■■■■□ 23.4
NKRFO15226 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.289e-8■■■■□ 23.4
NKRFO15226 BID-206ENST00000473439 638 ntTSL 222.76■■□□□ 1.239e-8■■■■□ 23.4
NKRFO15226 BID-203ENST00000399765 1879 ntTSL 2 BASIC22.63■■□□□ 1.219e-8■■■■□ 23.4
NKRFO15226 BID-204ENST00000399767 2129 ntTSL 2 BASIC22.21■■□□□ 1.159e-8■■■■□ 23.4
NKRFO15226 BID-208ENST00000550946 1394 ntTSL 1 (best)21.61■■□□□ 1.059e-8■■■■□ 23.4
NKRFO15226 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.959e-8■■■■□ 23.4
NKRFO15226 BID-210ENST00000552886 330 ntTSL 316.01■□□□□ 0.159e-8■■■■□ 23.4
NKRFO15226 BID-209ENST00000551952 700 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.19e-8■■■■□ 23.4
NKRFO15226 BID-211ENST00000611040 419 ntTSL 1 (best) BASIC13.96□□□□□ -0.179e-8■■■■□ 23.4
NKRFO15226 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.299e-9■■■■□ 23.3
NKRFO15226 ITPR2-201ENST00000242737 581 ntTSL 1 (best) BASIC12.6□□□□□ -0.399e-9■■■■□ 23.3
NKRFO15226 ITPR2-209ENST00000545235 540 ntTSL 1 (best)9.89□□□□□ -0.839e-9■■■■□ 23.3
NKRFO15226 FAM76B-211ENST00000543641 1379 ntTSL 1 (best)30.62■■■□□ 2.495e-7■■■■□ 23.3
NKRFO15226 FAM76B-212ENST00000545654 2001 ntTSL 228.02■■■□□ 2.085e-7■■■■□ 23.3
NKRFO15226 FAM76B-207ENST00000538316 585 ntTSL 526.64■■□□□ 1.865e-7■■■■□ 23.3
NKRFO15226 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC21.98■■□□□ 1.115e-7■■■■□ 23.3
NKRFO15226 NPEPPS-220ENST00000533573 559 ntTSL 419.6■□□□□ 0.735e-7■■■■□ 23.3
NKRFO15226 FAM76B-210ENST00000542135 610 ntTSL 219.24■□□□□ 0.675e-7■■■■□ 23.3
NKRFO15226 FAM76B-202ENST00000398187 3823 ntTSL 1 (best)18.34■□□□□ 0.535e-7■■■■□ 23.3
NKRFO15226 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.485e-7■■■■□ 23.3
NKRFO15226 BMP4-203ENST00000558489 605 ntTSL 317.45■□□□□ 0.385e-7■■■■□ 23.3
NKRFO15226 FAM76B-208ENST00000540054 730 ntTSL 216.5■□□□□ 0.235e-7■■■■□ 23.3
NKRFO15226 MLLT6-208ENST00000619356 3868 ntTSL 1 (best)16.18■□□□□ 0.185e-7■■■■□ 23.3
NKRFO15226 NPEPPS-221ENST00000534691 548 ntTSL 515.95■□□□□ 0.145e-7■■■■□ 23.3
NKRFO15226 NPEPPS-218ENST00000532729 711 ntTSL 315.95■□□□□ 0.145e-7■■■■□ 23.3
NKRFO15226 NPEPPS-207ENST00000526247 678 ntTSL 315.73■□□□□ 0.115e-7■■■■□ 23.3
NKRFO15226 MLLT6-204ENST00000615441 395 ntTSL 315.33■□□□□ 0.045e-7■■■■□ 23.3
NKRFO15226 NPEPPS-208ENST00000527298 1569 ntTSL 1 (best)15.24■□□□□ 0.035e-7■■■■□ 23.3
NKRFO15226 MLLT6-205ENST00000615741 2937 nt15.07■□□□□ 05e-7■■■■□ 23.3
NKRFO15226 NPEPPS-202ENST00000525007 649 ntTSL 315.03■□□□□ -05e-7■■■■□ 23.3
NKRFO15226 NPEPPS-213ENST00000528751 558 ntTSL 413.78□□□□□ -0.25e-7■■■■□ 23.3
NKRFO15226 FBXO11-209ENST00000492225 2216 ntTSL 1 (best)13.69□□□□□ -0.225e-7■■■■□ 23.3
NKRFO15226 NPEPPS-201ENST00000322157 4353 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.575e-7■■■■□ 23.3
NKRFO15226 FBXO11-202ENST00000403359 4055 ntTSL 1 (best) BASIC9□□□□□ -0.975e-7■■■■□ 23.3
NKRFO15226 NPEPPS-215ENST00000530173 2864 ntTSL 2 BASIC8.98□□□□□ -0.975e-7■■■■□ 23.3
NKRFO15226 NPEPPS-204ENST00000525037 1406 ntTSL 56.56□□□□□ -1.365e-7■■■■□ 23.3
NKRFO15226 FBXO11-204ENST00000424163 560 ntTSL 44.09□□□□□ -1.755e-7■■■■□ 23.3
NKRFO15226 MPP5-203ENST00000554911 363 ntTSL 331.73■■■□□ 2.675e-6■■■■□ 23.2
Retrieved 100 of 9,198 protein–RNA pairs in 151.3 ms