Protein–RNA interactions for Protein: A6NHP3

SPDYE2B, Speedy protein E2B, humanhuman

Predictions only

Length 402 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE2BA6NHP3 AC022413.1-201ENST00000624602 984 ntBASIC31.02■■■□□ 2.56
SPDYE2BA6NHP3 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
SPDYE2BA6NHP3 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
SPDYE2BA6NHP3 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC31.01■■■□□ 2.55
SPDYE2BA6NHP3 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
SPDYE2BA6NHP3 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
SPDYE2BA6NHP3 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
SPDYE2BA6NHP3 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC30.99■■■□□ 2.55
SPDYE2BA6NHP3 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
SPDYE2BA6NHP3 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC30.98■■■□□ 2.55
SPDYE2BA6NHP3 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC30.98■■■□□ 2.55
SPDYE2BA6NHP3 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC30.98■■■□□ 2.55
SPDYE2BA6NHP3 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
SPDYE2BA6NHP3 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
SPDYE2BA6NHP3 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
SPDYE2BA6NHP3 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
SPDYE2BA6NHP3 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
SPDYE2BA6NHP3 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC30.97■■■□□ 2.55
SPDYE2BA6NHP3 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC30.96■■■□□ 2.55
SPDYE2BA6NHP3 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC30.96■■■□□ 2.55
SPDYE2BA6NHP3 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC30.94■■■□□ 2.54
SPDYE2BA6NHP3 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC30.92■■■□□ 2.54
SPDYE2BA6NHP3 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
SPDYE2BA6NHP3 CHST11-203ENST00000547956 936 ntTSL 2 BASIC30.92■■■□□ 2.54
SPDYE2BA6NHP3 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
SPDYE2BA6NHP3 AL135925.1-201ENST00000605920 1701 ntBASIC30.92■■■□□ 2.54
SPDYE2BA6NHP3 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC30.91■■■□□ 2.54
SPDYE2BA6NHP3 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC30.91■■■□□ 2.54
SPDYE2BA6NHP3 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC30.91■■■□□ 2.54
SPDYE2BA6NHP3 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC30.91■■■□□ 2.54
SPDYE2BA6NHP3 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC30.9■■■□□ 2.54
SPDYE2BA6NHP3 HES4-202ENST00000428771 1040 ntTSL 2 BASIC30.9■■■□□ 2.54
SPDYE2BA6NHP3 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC30.9■■■□□ 2.54
SPDYE2BA6NHP3 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
SPDYE2BA6NHP3 AC110285.7-201ENST00000624417 1536 ntBASIC30.89■■■□□ 2.54
SPDYE2BA6NHP3 NTF6A-201ENST00000591175 560 ntBASIC30.89■■■□□ 2.54
SPDYE2BA6NHP3 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC30.88■■■□□ 2.53
SPDYE2BA6NHP3 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
SPDYE2BA6NHP3 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC30.87■■■□□ 2.53
SPDYE2BA6NHP3 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
SPDYE2BA6NHP3 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
SPDYE2BA6NHP3 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC30.85■■■□□ 2.53
SPDYE2BA6NHP3 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
SPDYE2BA6NHP3 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
SPDYE2BA6NHP3 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC30.85■■■□□ 2.53
SPDYE2BA6NHP3 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
SPDYE2BA6NHP3 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC30.84■■■□□ 2.53
SPDYE2BA6NHP3 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC30.84■■■□□ 2.53
SPDYE2BA6NHP3 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC30.84■■■□□ 2.53
SPDYE2BA6NHP3 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC30.84■■■□□ 2.53
SPDYE2BA6NHP3 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
SPDYE2BA6NHP3 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC30.84■■■□□ 2.53
SPDYE2BA6NHP3 AC148477.6-201ENST00000623746 465 ntBASIC30.84■■■□□ 2.53
SPDYE2BA6NHP3 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC30.83■■■□□ 2.53
SPDYE2BA6NHP3 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
SPDYE2BA6NHP3 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC30.81■■■□□ 2.52
SPDYE2BA6NHP3 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC30.81■■■□□ 2.52
SPDYE2BA6NHP3 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC30.81■■■□□ 2.52
SPDYE2BA6NHP3 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
SPDYE2BA6NHP3 AC060814.1-201ENST00000554326 538 ntBASIC30.79■■■□□ 2.52
SPDYE2BA6NHP3 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
SPDYE2BA6NHP3 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC30.78■■■□□ 2.52
SPDYE2BA6NHP3 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC30.78■■■□□ 2.52
SPDYE2BA6NHP3 AC012354.3-201ENST00000623734 483 ntBASIC30.78■■■□□ 2.52
SPDYE2BA6NHP3 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC30.78■■■□□ 2.52
SPDYE2BA6NHP3 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
SPDYE2BA6NHP3 RPS2-210ENST00000530225 765 ntTSL 2 BASIC30.77■■■□□ 2.52
SPDYE2BA6NHP3 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
SPDYE2BA6NHP3 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC30.74■■■□□ 2.51
SPDYE2BA6NHP3 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
SPDYE2BA6NHP3 PEX7-203ENST00000541292 945 ntTSL 5 BASIC30.73■■■□□ 2.51
SPDYE2BA6NHP3 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
SPDYE2BA6NHP3 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
SPDYE2BA6NHP3 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC30.72■■■□□ 2.51
SPDYE2BA6NHP3 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
SPDYE2BA6NHP3 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
SPDYE2BA6NHP3 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC30.72■■■□□ 2.51
SPDYE2BA6NHP3 MIR219A2-201ENST00000608502 1504 ntBASIC30.72■■■□□ 2.51
SPDYE2BA6NHP3 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
SPDYE2BA6NHP3 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
SPDYE2BA6NHP3 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
SPDYE2BA6NHP3 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC30.71■■■□□ 2.51
SPDYE2BA6NHP3 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC30.71■■■□□ 2.51
SPDYE2BA6NHP3 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
SPDYE2BA6NHP3 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC30.7■■■□□ 2.51
SPDYE2BA6NHP3 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC30.69■■■□□ 2.5
SPDYE2BA6NHP3 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC30.69■■■□□ 2.5
SPDYE2BA6NHP3 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC30.69■■■□□ 2.5
SPDYE2BA6NHP3 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
SPDYE2BA6NHP3 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
SPDYE2BA6NHP3 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC30.67■■■□□ 2.5
SPDYE2BA6NHP3 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
SPDYE2BA6NHP3 U85056.1-201ENST00000616429 682 ntBASIC30.67■■■□□ 2.5
SPDYE2BA6NHP3 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
SPDYE2BA6NHP3 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC30.67■■■□□ 2.5
SPDYE2BA6NHP3 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC30.67■■■□□ 2.5
SPDYE2BA6NHP3 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
SPDYE2BA6NHP3 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
SPDYE2BA6NHP3 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC30.66■■■□□ 2.5
SPDYE2BA6NHP3 HYI-213ENST00000583037 1322 ntTSL 5 BASIC30.66■■■□□ 2.5
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms