Protein–RNA interactions for Protein: A4FU49

SH3D21, SH3 domain-containing protein 21, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21A4FU49 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC23.62■■□□□ 1.37
SH3D21A4FU49 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC23.62■■□□□ 1.37
SH3D21A4FU49 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC23.62■■□□□ 1.37
SH3D21A4FU49 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SH3D21A4FU49 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SH3D21A4FU49 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SH3D21A4FU49 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
SH3D21A4FU49 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
SH3D21A4FU49 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
SH3D21A4FU49 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC23.61■■□□□ 1.37
SH3D21A4FU49 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
SH3D21A4FU49 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
SH3D21A4FU49 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
SH3D21A4FU49 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC23.6■■□□□ 1.37
SH3D21A4FU49 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SH3D21A4FU49 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SH3D21A4FU49 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SH3D21A4FU49 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
SH3D21A4FU49 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SH3D21A4FU49 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
SH3D21A4FU49 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC23.59■■□□□ 1.37
SH3D21A4FU49 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC23.58■■□□□ 1.37
SH3D21A4FU49 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
SH3D21A4FU49 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
SH3D21A4FU49 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
SH3D21A4FU49 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC23.57■■□□□ 1.36
SH3D21A4FU49 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
SH3D21A4FU49 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC23.56■■□□□ 1.36
SH3D21A4FU49 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
SH3D21A4FU49 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
SH3D21A4FU49 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
SH3D21A4FU49 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC23.55■■□□□ 1.36
SH3D21A4FU49 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
SH3D21A4FU49 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC23.55■■□□□ 1.36
SH3D21A4FU49 SHF-207ENST00000560540 2062 ntTSL 5 BASIC23.55■■□□□ 1.36
SH3D21A4FU49 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
SH3D21A4FU49 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
SH3D21A4FU49 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
SH3D21A4FU49 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC23.53■■□□□ 1.36
SH3D21A4FU49 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SH3D21A4FU49 ZNRF2P2-203ENST00000454624 420 ntBASIC23.53■■□□□ 1.36
SH3D21A4FU49 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
SH3D21A4FU49 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
SH3D21A4FU49 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
SH3D21A4FU49 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
SH3D21A4FU49 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
SH3D21A4FU49 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC23.51■■□□□ 1.35
SH3D21A4FU49 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
SH3D21A4FU49 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SH3D21A4FU49 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
SH3D21A4FU49 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC23.51■■□□□ 1.35
SH3D21A4FU49 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SH3D21A4FU49 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC23.51■■□□□ 1.35
SH3D21A4FU49 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC23.5■■□□□ 1.35
SH3D21A4FU49 HLA-V-202ENST00000446817 847 ntBASIC23.5■■□□□ 1.35
SH3D21A4FU49 HGH1-207ENST00000628266 258 ntTSL 5 BASIC23.5■■□□□ 1.35
SH3D21A4FU49 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
SH3D21A4FU49 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC23.5■■□□□ 1.35
SH3D21A4FU49 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
SH3D21A4FU49 BX255925.1-201ENST00000566954 1854 ntBASIC23.49■■□□□ 1.35
SH3D21A4FU49 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
SH3D21A4FU49 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
SH3D21A4FU49 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC23.49■■□□□ 1.35
SH3D21A4FU49 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC23.49■■□□□ 1.35
SH3D21A4FU49 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC23.49■■□□□ 1.35
SH3D21A4FU49 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC23.49■■□□□ 1.35
SH3D21A4FU49 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
SH3D21A4FU49 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
SH3D21A4FU49 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
SH3D21A4FU49 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC23.48■■□□□ 1.35
SH3D21A4FU49 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
SH3D21A4FU49 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC23.48■■□□□ 1.35
SH3D21A4FU49 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC23.48■■□□□ 1.35
SH3D21A4FU49 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC23.47■■□□□ 1.35
SH3D21A4FU49 DUX4L29-201ENST00000425409 679 ntBASIC23.47■■□□□ 1.35
SH3D21A4FU49 MBP-237ENST00000579129 1052 ntTSL 5 BASIC23.47■■□□□ 1.35
SH3D21A4FU49 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
SH3D21A4FU49 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
SH3D21A4FU49 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC23.46■■□□□ 1.35
SH3D21A4FU49 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC23.46■■□□□ 1.35
SH3D21A4FU49 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
SH3D21A4FU49 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC23.46■■□□□ 1.35
SH3D21A4FU49 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC23.46■■□□□ 1.35
SH3D21A4FU49 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC23.45■■□□□ 1.35
SH3D21A4FU49 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
SH3D21A4FU49 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC23.45■■□□□ 1.34
SH3D21A4FU49 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
SH3D21A4FU49 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
SH3D21A4FU49 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
SH3D21A4FU49 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
SH3D21A4FU49 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC23.43■■□□□ 1.34
SH3D21A4FU49 SHF-208ENST00000560734 1731 ntTSL 3 BASIC23.43■■□□□ 1.34
SH3D21A4FU49 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.34
SH3D21A4FU49 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
SH3D21A4FU49 PROC-203ENST00000409048 1586 ntTSL 5 BASIC23.43■■□□□ 1.34
SH3D21A4FU49 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC23.43■■□□□ 1.34
SH3D21A4FU49 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
SH3D21A4FU49 AC010864.1-201ENST00000609407 1511 ntBASIC23.43■■□□□ 1.34
SH3D21A4FU49 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
SH3D21A4FU49 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC23.42■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms