Protein–RNA interactions for Protein: A0A0C4DH27

TRGV8, T-cell receptor gamma variable 8 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV8A0A0C4DH27 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
TRGV8A0A0C4DH27 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
TRGV8A0A0C4DH27 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
TRGV8A0A0C4DH27 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
TRGV8A0A0C4DH27 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC23.07■■□□□ 1.28
TRGV8A0A0C4DH27 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
TRGV8A0A0C4DH27 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
TRGV8A0A0C4DH27 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
TRGV8A0A0C4DH27 AC012354.3-201ENST00000623734 483 ntBASIC23.06■■□□□ 1.28
TRGV8A0A0C4DH27 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
TRGV8A0A0C4DH27 AC127502.1-201ENST00000399971 1502 ntBASIC23.05■■□□□ 1.28
TRGV8A0A0C4DH27 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC23.05■■□□□ 1.28
TRGV8A0A0C4DH27 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
TRGV8A0A0C4DH27 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC23.05■■□□□ 1.28
TRGV8A0A0C4DH27 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
TRGV8A0A0C4DH27 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
TRGV8A0A0C4DH27 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
TRGV8A0A0C4DH27 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
TRGV8A0A0C4DH27 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
TRGV8A0A0C4DH27 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
TRGV8A0A0C4DH27 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC23.02■■□□□ 1.28
TRGV8A0A0C4DH27 WHAMMP2-203ENST00000563942 1603 ntBASIC23.02■■□□□ 1.28
TRGV8A0A0C4DH27 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
TRGV8A0A0C4DH27 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
TRGV8A0A0C4DH27 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
TRGV8A0A0C4DH27 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
TRGV8A0A0C4DH27 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC23■■□□□ 1.27
TRGV8A0A0C4DH27 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC23■■□□□ 1.27
TRGV8A0A0C4DH27 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC23■■□□□ 1.27
TRGV8A0A0C4DH27 AC135983.2-203ENST00000454486 1613 ntBASIC23■■□□□ 1.27
TRGV8A0A0C4DH27 CHST11-203ENST00000547956 936 ntTSL 2 BASIC22.99■■□□□ 1.27
TRGV8A0A0C4DH27 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
TRGV8A0A0C4DH27 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC22.99■■□□□ 1.27
TRGV8A0A0C4DH27 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
TRGV8A0A0C4DH27 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
TRGV8A0A0C4DH27 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC22.98■■□□□ 1.27
TRGV8A0A0C4DH27 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC22.98■■□□□ 1.27
TRGV8A0A0C4DH27 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
TRGV8A0A0C4DH27 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
TRGV8A0A0C4DH27 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC22.97■■□□□ 1.27
TRGV8A0A0C4DH27 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
TRGV8A0A0C4DH27 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
TRGV8A0A0C4DH27 AC110285.7-201ENST00000624417 1536 ntBASIC22.97■■□□□ 1.27
TRGV8A0A0C4DH27 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC22.96■■□□□ 1.27
TRGV8A0A0C4DH27 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC22.96■■□□□ 1.27
TRGV8A0A0C4DH27 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC22.96■■□□□ 1.27
TRGV8A0A0C4DH27 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
TRGV8A0A0C4DH27 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.26
TRGV8A0A0C4DH27 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC22.94■■□□□ 1.26
TRGV8A0A0C4DH27 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC22.94■■□□□ 1.26
TRGV8A0A0C4DH27 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
TRGV8A0A0C4DH27 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
TRGV8A0A0C4DH27 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
TRGV8A0A0C4DH27 AL033527.3-201ENST00000566366 1196 ntBASIC22.92■■□□□ 1.26
TRGV8A0A0C4DH27 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC22.92■■□□□ 1.26
TRGV8A0A0C4DH27 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC22.92■■□□□ 1.26
TRGV8A0A0C4DH27 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC22.91■■□□□ 1.26
TRGV8A0A0C4DH27 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC22.91■■□□□ 1.26
TRGV8A0A0C4DH27 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC22.91■■□□□ 1.26
TRGV8A0A0C4DH27 HYI-213ENST00000583037 1322 ntTSL 5 BASIC22.9■■□□□ 1.26
TRGV8A0A0C4DH27 AC060814.1-201ENST00000554326 538 ntBASIC22.9■■□□□ 1.26
TRGV8A0A0C4DH27 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC22.9■■□□□ 1.26
TRGV8A0A0C4DH27 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
TRGV8A0A0C4DH27 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
TRGV8A0A0C4DH27 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC22.9■■□□□ 1.26
TRGV8A0A0C4DH27 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
TRGV8A0A0C4DH27 AC148477.6-201ENST00000623746 465 ntBASIC22.89■■□□□ 1.25
TRGV8A0A0C4DH27 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
TRGV8A0A0C4DH27 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC22.88■■□□□ 1.25
TRGV8A0A0C4DH27 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC22.88■■□□□ 1.25
TRGV8A0A0C4DH27 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC22.88■■□□□ 1.25
TRGV8A0A0C4DH27 U85056.1-201ENST00000616429 682 ntBASIC22.88■■□□□ 1.25
TRGV8A0A0C4DH27 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC22.87■■□□□ 1.25
TRGV8A0A0C4DH27 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC22.87■■□□□ 1.25
TRGV8A0A0C4DH27 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
TRGV8A0A0C4DH27 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
TRGV8A0A0C4DH27 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC22.87■■□□□ 1.25
TRGV8A0A0C4DH27 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
TRGV8A0A0C4DH27 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
TRGV8A0A0C4DH27 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
TRGV8A0A0C4DH27 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC22.85■■□□□ 1.25
TRGV8A0A0C4DH27 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
TRGV8A0A0C4DH27 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
TRGV8A0A0C4DH27 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
TRGV8A0A0C4DH27 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC22.84■■□□□ 1.25
TRGV8A0A0C4DH27 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
TRGV8A0A0C4DH27 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC22.84■■□□□ 1.25
TRGV8A0A0C4DH27 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
TRGV8A0A0C4DH27 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
TRGV8A0A0C4DH27 AC018358.1-201ENST00000631079 1402 ntBASIC22.83■■□□□ 1.25
TRGV8A0A0C4DH27 MIR219A2-201ENST00000608502 1504 ntBASIC22.83■■□□□ 1.25
TRGV8A0A0C4DH27 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC22.83■■□□□ 1.25
TRGV8A0A0C4DH27 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC22.83■■□□□ 1.25
TRGV8A0A0C4DH27 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
TRGV8A0A0C4DH27 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
TRGV8A0A0C4DH27 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC22.82■■□□□ 1.24
TRGV8A0A0C4DH27 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
TRGV8A0A0C4DH27 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC22.82■■□□□ 1.24
TRGV8A0A0C4DH27 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC22.81■■□□□ 1.24
TRGV8A0A0C4DH27 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms