Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
TRAV18A0A075B6X5 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
TRAV18A0A075B6X5 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC21.95■■□□□ 1.1
TRAV18A0A075B6X5 AL133380.1-201ENST00000506013 324 ntBASIC21.95■■□□□ 1.1
TRAV18A0A075B6X5 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC21.95■■□□□ 1.1
TRAV18A0A075B6X5 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
TRAV18A0A075B6X5 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
TRAV18A0A075B6X5 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
TRAV18A0A075B6X5 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
TRAV18A0A075B6X5 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC21.94■■□□□ 1.1
TRAV18A0A075B6X5 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TRAV18A0A075B6X5 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC21.94■■□□□ 1.1
TRAV18A0A075B6X5 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
TRAV18A0A075B6X5 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
TRAV18A0A075B6X5 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC21.93■■□□□ 1.1
TRAV18A0A075B6X5 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
TRAV18A0A075B6X5 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC21.93■■□□□ 1.1
TRAV18A0A075B6X5 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC21.93■■□□□ 1.1
TRAV18A0A075B6X5 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC21.93■■□□□ 1.1
TRAV18A0A075B6X5 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC21.93■■□□□ 1.1
TRAV18A0A075B6X5 LINC01003-201ENST00000564834 1764 ntBASIC21.93■■□□□ 1.1
TRAV18A0A075B6X5 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC21.93■■□□□ 1.1
TRAV18A0A075B6X5 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
TRAV18A0A075B6X5 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC21.92■■□□□ 1.1
TRAV18A0A075B6X5 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
TRAV18A0A075B6X5 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC21.91■■□□□ 1.1
TRAV18A0A075B6X5 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TRAV18A0A075B6X5 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC21.91■■□□□ 1.1
TRAV18A0A075B6X5 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC21.9■■□□□ 1.1
TRAV18A0A075B6X5 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
TRAV18A0A075B6X5 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC21.9■■□□□ 1.1
TRAV18A0A075B6X5 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
TRAV18A0A075B6X5 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
TRAV18A0A075B6X5 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
TRAV18A0A075B6X5 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
TRAV18A0A075B6X5 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC21.9■■□□□ 1.1
TRAV18A0A075B6X5 KLF16-203ENST00000592313 508 ntTSL 3 BASIC21.89■■□□□ 1.09
TRAV18A0A075B6X5 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC21.89■■□□□ 1.09
TRAV18A0A075B6X5 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC21.89■■□□□ 1.09
TRAV18A0A075B6X5 PKM-203ENST00000389093 2279 ntTSL 5 BASIC21.89■■□□□ 1.09
TRAV18A0A075B6X5 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
TRAV18A0A075B6X5 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TRAV18A0A075B6X5 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC21.88■■□□□ 1.09
TRAV18A0A075B6X5 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TRAV18A0A075B6X5 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
TRAV18A0A075B6X5 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
TRAV18A0A075B6X5 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
TRAV18A0A075B6X5 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
TRAV18A0A075B6X5 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
TRAV18A0A075B6X5 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC21.88■■□□□ 1.09
TRAV18A0A075B6X5 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TRAV18A0A075B6X5 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
TRAV18A0A075B6X5 AL449106.1-201ENST00000608517 1980 ntBASIC21.87■■□□□ 1.09
TRAV18A0A075B6X5 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TRAV18A0A075B6X5 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC21.86■■□□□ 1.09
TRAV18A0A075B6X5 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC21.86■■□□□ 1.09
TRAV18A0A075B6X5 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
TRAV18A0A075B6X5 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC21.86■■□□□ 1.09
TRAV18A0A075B6X5 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
TRAV18A0A075B6X5 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
TRAV18A0A075B6X5 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC21.85■■□□□ 1.09
TRAV18A0A075B6X5 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
TRAV18A0A075B6X5 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
TRAV18A0A075B6X5 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.84■■□□□ 1.09
TRAV18A0A075B6X5 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
TRAV18A0A075B6X5 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
TRAV18A0A075B6X5 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
TRAV18A0A075B6X5 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
TRAV18A0A075B6X5 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC21.82■■□□□ 1.08
TRAV18A0A075B6X5 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TRAV18A0A075B6X5 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC21.81■■□□□ 1.08
TRAV18A0A075B6X5 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
TRAV18A0A075B6X5 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC21.81■■□□□ 1.08
TRAV18A0A075B6X5 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
TRAV18A0A075B6X5 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
TRAV18A0A075B6X5 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
TRAV18A0A075B6X5 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC21.8■■□□□ 1.08
TRAV18A0A075B6X5 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TRAV18A0A075B6X5 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC21.79■■□□□ 1.08
TRAV18A0A075B6X5 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TRAV18A0A075B6X5 AC127502.1-201ENST00000399971 1502 ntBASIC21.79■■□□□ 1.08
TRAV18A0A075B6X5 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
TRAV18A0A075B6X5 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC21.78■■□□□ 1.08
TRAV18A0A075B6X5 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TRAV18A0A075B6X5 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
TRAV18A0A075B6X5 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TRAV18A0A075B6X5 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TRAV18A0A075B6X5 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
TRAV18A0A075B6X5 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
TRAV18A0A075B6X5 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TRAV18A0A075B6X5 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC21.76■■□□□ 1.07
TRAV18A0A075B6X5 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TRAV18A0A075B6X5 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
TRAV18A0A075B6X5 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TRAV18A0A075B6X5 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC21.75■■□□□ 1.07
TRAV18A0A075B6X5 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TRAV18A0A075B6X5 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC21.75■■□□□ 1.07
TRAV18A0A075B6X5 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRAV18A0A075B6X5 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
TRAV18A0A075B6X5 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms