Protein–RNA interactions for Protein: Q9Y2Q9

MRPS28, 28S ribosomal protein S28, mitochondrial, humanhuman

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28Q9Y2Q9 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC16.82■□□□□ 0.28
MRPS28Q9Y2Q9 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
MRPS28Q9Y2Q9 MIR6821-201ENST00000617625 74 ntBASIC16.82■□□□□ 0.28
MRPS28Q9Y2Q9 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MRPS28Q9Y2Q9 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC16.82■□□□□ 0.28
MRPS28Q9Y2Q9 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC16.82■□□□□ 0.28
MRPS28Q9Y2Q9 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MRPS28Q9Y2Q9 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
MRPS28Q9Y2Q9 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MRPS28Q9Y2Q9 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
MRPS28Q9Y2Q9 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
MRPS28Q9Y2Q9 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC16.82■□□□□ 0.28
MRPS28Q9Y2Q9 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
MRPS28Q9Y2Q9 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MRPS28Q9Y2Q9 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MRPS28Q9Y2Q9 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MRPS28Q9Y2Q9 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MRPS28Q9Y2Q9 MCC-208ENST00000514701 2855 ntTSL 2 BASIC16.81■□□□□ 0.28
MRPS28Q9Y2Q9 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
MRPS28Q9Y2Q9 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
MRPS28Q9Y2Q9 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC16.81■□□□□ 0.28
MRPS28Q9Y2Q9 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC16.81■□□□□ 0.28
MRPS28Q9Y2Q9 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
MRPS28Q9Y2Q9 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
MRPS28Q9Y2Q9 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MRPS28Q9Y2Q9 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC16.81■□□□□ 0.28
MRPS28Q9Y2Q9 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MRPS28Q9Y2Q9 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MRPS28Q9Y2Q9 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MRPS28Q9Y2Q9 KRT18P5-201ENST00000436075 1291 ntBASIC16.81■□□□□ 0.28
MRPS28Q9Y2Q9 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC16.81■□□□□ 0.28
MRPS28Q9Y2Q9 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC16.81■□□□□ 0.28
MRPS28Q9Y2Q9 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC16.81■□□□□ 0.28
MRPS28Q9Y2Q9 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
MRPS28Q9Y2Q9 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MRPS28Q9Y2Q9 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
MRPS28Q9Y2Q9 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MRPS28Q9Y2Q9 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MRPS28Q9Y2Q9 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC16.81■□□□□ 0.28
MRPS28Q9Y2Q9 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MRPS28Q9Y2Q9 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
MRPS28Q9Y2Q9 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
MRPS28Q9Y2Q9 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
MRPS28Q9Y2Q9 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
MRPS28Q9Y2Q9 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
MRPS28Q9Y2Q9 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
MRPS28Q9Y2Q9 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
MRPS28Q9Y2Q9 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
MRPS28Q9Y2Q9 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
MRPS28Q9Y2Q9 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
MRPS28Q9Y2Q9 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
MRPS28Q9Y2Q9 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
MRPS28Q9Y2Q9 RARRES2P6-201ENST00000567333 442 ntBASIC16.8■□□□□ 0.28
MRPS28Q9Y2Q9 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC16.8■□□□□ 0.28
MRPS28Q9Y2Q9 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
MRPS28Q9Y2Q9 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
MRPS28Q9Y2Q9 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
MRPS28Q9Y2Q9 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
MRPS28Q9Y2Q9 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
MRPS28Q9Y2Q9 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
MRPS28Q9Y2Q9 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
MRPS28Q9Y2Q9 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC16.8■□□□□ 0.28
MRPS28Q9Y2Q9 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC16.8■□□□□ 0.28
MRPS28Q9Y2Q9 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
MRPS28Q9Y2Q9 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
MRPS28Q9Y2Q9 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
MRPS28Q9Y2Q9 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC16.8■□□□□ 0.28
MRPS28Q9Y2Q9 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
MRPS28Q9Y2Q9 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
MRPS28Q9Y2Q9 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
MRPS28Q9Y2Q9 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
MRPS28Q9Y2Q9 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
MRPS28Q9Y2Q9 AC010980.2-201ENST00000587099 1412 ntBASIC16.79■□□□□ 0.28
MRPS28Q9Y2Q9 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC16.79■□□□□ 0.28
MRPS28Q9Y2Q9 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
MRPS28Q9Y2Q9 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
MRPS28Q9Y2Q9 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
MRPS28Q9Y2Q9 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC16.79■□□□□ 0.28
MRPS28Q9Y2Q9 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
MRPS28Q9Y2Q9 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
MRPS28Q9Y2Q9 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC16.79■□□□□ 0.28
MRPS28Q9Y2Q9 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
MRPS28Q9Y2Q9 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
MRPS28Q9Y2Q9 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
MRPS28Q9Y2Q9 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
MRPS28Q9Y2Q9 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC16.79■□□□□ 0.28
MRPS28Q9Y2Q9 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC16.79■□□□□ 0.28
MRPS28Q9Y2Q9 OR10C1-204ENST00000622521 1039 ntBASIC16.79■□□□□ 0.28
MRPS28Q9Y2Q9 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
MRPS28Q9Y2Q9 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC16.79■□□□□ 0.28
MRPS28Q9Y2Q9 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
MRPS28Q9Y2Q9 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
MRPS28Q9Y2Q9 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
MRPS28Q9Y2Q9 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
MRPS28Q9Y2Q9 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MRPS28Q9Y2Q9 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MRPS28Q9Y2Q9 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MRPS28Q9Y2Q9 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
MRPS28Q9Y2Q9 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MRPS28Q9Y2Q9 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms