Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC12.32□□□□□ -0.44
SVIPQ8NHG7 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SVIPQ8NHG7 CCER1-201ENST00000358859 2962 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
SVIPQ8NHG7 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SVIPQ8NHG7 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SVIPQ8NHG7 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC12.32□□□□□ -0.44
SVIPQ8NHG7 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC12.32□□□□□ -0.44
SVIPQ8NHG7 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC12.32□□□□□ -0.44
SVIPQ8NHG7 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
SVIPQ8NHG7 TASP1-201ENST00000337743 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SVIPQ8NHG7 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SVIPQ8NHG7 AP004609.3-201ENST00000610705 1884 ntBASIC12.31□□□□□ -0.44
SVIPQ8NHG7 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SVIPQ8NHG7 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SVIPQ8NHG7 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SVIPQ8NHG7 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
SVIPQ8NHG7 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SVIPQ8NHG7 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC12.31□□□□□ -0.44
SVIPQ8NHG7 DLEU1-231ENST00000490577 2440 ntTSL 5 BASIC12.31□□□□□ -0.44
SVIPQ8NHG7 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
SVIPQ8NHG7 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
SVIPQ8NHG7 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
SVIPQ8NHG7 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SVIPQ8NHG7 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
SVIPQ8NHG7 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC12.31□□□□□ -0.44
SVIPQ8NHG7 HAO1-201ENST00000378789 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SVIPQ8NHG7 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC12.31□□□□□ -0.44
SVIPQ8NHG7 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SVIPQ8NHG7 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SVIPQ8NHG7 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC12.31□□□□□ -0.44
SVIPQ8NHG7 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SVIPQ8NHG7 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC12.31□□□□□ -0.44
SVIPQ8NHG7 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
SVIPQ8NHG7 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
SVIPQ8NHG7 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC12.31□□□□□ -0.44
SVIPQ8NHG7 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SVIPQ8NHG7 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
SVIPQ8NHG7 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC12.31□□□□□ -0.44
SVIPQ8NHG7 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SVIPQ8NHG7 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC12.31□□□□□ -0.44
SVIPQ8NHG7 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC12.31□□□□□ -0.44
SVIPQ8NHG7 PTGES2-AS1-201ENST00000443493 2100 ntBASIC12.31□□□□□ -0.44
SVIPQ8NHG7 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC12.31□□□□□ -0.44
SVIPQ8NHG7 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SVIPQ8NHG7 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SVIPQ8NHG7 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SVIPQ8NHG7 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
SVIPQ8NHG7 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
SVIPQ8NHG7 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
SVIPQ8NHG7 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SVIPQ8NHG7 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SVIPQ8NHG7 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
SVIPQ8NHG7 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
SVIPQ8NHG7 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC12.3□□□□□ -0.44
SVIPQ8NHG7 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC12.3□□□□□ -0.44
SVIPQ8NHG7 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SVIPQ8NHG7 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SVIPQ8NHG7 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SVIPQ8NHG7 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC12.3□□□□□ -0.44
SVIPQ8NHG7 FUK-207ENST00000571514 3054 ntTSL 2 BASIC12.3□□□□□ -0.44
SVIPQ8NHG7 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
SVIPQ8NHG7 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SVIPQ8NHG7 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SVIPQ8NHG7 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SVIPQ8NHG7 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SVIPQ8NHG7 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC12.3□□□□□ -0.44
SVIPQ8NHG7 ATP2C2-AS1-201ENST00000565700 2998 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SVIPQ8NHG7 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SVIPQ8NHG7 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC12.3□□□□□ -0.44
SVIPQ8NHG7 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SVIPQ8NHG7 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC12.3□□□□□ -0.44
SVIPQ8NHG7 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
SVIPQ8NHG7 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SVIPQ8NHG7 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC12.3□□□□□ -0.44
SVIPQ8NHG7 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SVIPQ8NHG7 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
SVIPQ8NHG7 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
SVIPQ8NHG7 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
SVIPQ8NHG7 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
SVIPQ8NHG7 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC12.3□□□□□ -0.44
SVIPQ8NHG7 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SVIPQ8NHG7 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC12.3□□□□□ -0.44
SVIPQ8NHG7 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC12.29□□□□□ -0.44
SVIPQ8NHG7 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC12.29□□□□□ -0.44
SVIPQ8NHG7 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SVIPQ8NHG7 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
SVIPQ8NHG7 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
SVIPQ8NHG7 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC12.29□□□□□ -0.44
SVIPQ8NHG7 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC12.29□□□□□ -0.44
SVIPQ8NHG7 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
SVIPQ8NHG7 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
SVIPQ8NHG7 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC12.29□□□□□ -0.44
SVIPQ8NHG7 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SVIPQ8NHG7 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC12.29□□□□□ -0.44
SVIPQ8NHG7 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
SVIPQ8NHG7 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SVIPQ8NHG7 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SVIPQ8NHG7 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SVIPQ8NHG7 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC12.29□□□□□ -0.44
SVIPQ8NHG7 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms