Protein–RNA interactions for Protein: P57729

RAB38, Ras-related protein Rab-38, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38P57729 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RAB38P57729 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.41■□□□□ 0.54
RAB38P57729 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
RAB38P57729 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RAB38P57729 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
RAB38P57729 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RAB38P57729 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RAB38P57729 TREX1-205ENST00000625293 1783 ntBASIC18.4■□□□□ 0.54
RAB38P57729 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
RAB38P57729 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
RAB38P57729 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
RAB38P57729 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
RAB38P57729 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC18.4■□□□□ 0.54
RAB38P57729 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC18.4■□□□□ 0.54
RAB38P57729 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC18.4■□□□□ 0.54
RAB38P57729 RARRES2P10-201ENST00000564312 460 ntBASIC18.4■□□□□ 0.54
RAB38P57729 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC18.4■□□□□ 0.54
RAB38P57729 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
RAB38P57729 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RAB38P57729 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.4■□□□□ 0.54
RAB38P57729 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
RAB38P57729 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.4■□□□□ 0.54
RAB38P57729 HTR7P1-201ENST00000538670 1336 ntBASIC18.4■□□□□ 0.54
RAB38P57729 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC18.4■□□□□ 0.54
RAB38P57729 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
RAB38P57729 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
RAB38P57729 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
RAB38P57729 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
RAB38P57729 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
RAB38P57729 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
RAB38P57729 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
RAB38P57729 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
RAB38P57729 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.39■□□□□ 0.53
RAB38P57729 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.39■□□□□ 0.53
RAB38P57729 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.39■□□□□ 0.53
RAB38P57729 AFG3L1P-217ENST00000557444 2447 ntBASIC18.39■□□□□ 0.53
RAB38P57729 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RAB38P57729 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RAB38P57729 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.39■□□□□ 0.53
RAB38P57729 BAALC-201ENST00000297574 801 ntTSL 3 BASIC18.39■□□□□ 0.53
RAB38P57729 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
RAB38P57729 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RAB38P57729 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
RAB38P57729 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
RAB38P57729 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC18.39■□□□□ 0.53
RAB38P57729 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.39■□□□□ 0.53
RAB38P57729 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.39■□□□□ 0.53
RAB38P57729 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC18.39■□□□□ 0.53
RAB38P57729 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC18.39■□□□□ 0.53
RAB38P57729 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
RAB38P57729 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC18.39■□□□□ 0.53
RAB38P57729 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RAB38P57729 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
RAB38P57729 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RAB38P57729 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RAB38P57729 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RAB38P57729 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
RAB38P57729 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
RAB38P57729 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
RAB38P57729 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RAB38P57729 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RAB38P57729 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC18.38■□□□□ 0.53
RAB38P57729 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
RAB38P57729 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.38■□□□□ 0.53
RAB38P57729 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RAB38P57729 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RAB38P57729 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.38■□□□□ 0.53
RAB38P57729 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RAB38P57729 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
RAB38P57729 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.38■□□□□ 0.53
RAB38P57729 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC18.38■□□□□ 0.53
RAB38P57729 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC18.38■□□□□ 0.53
RAB38P57729 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
RAB38P57729 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RAB38P57729 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC18.38■□□□□ 0.53
RAB38P57729 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC18.38■□□□□ 0.53
RAB38P57729 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
RAB38P57729 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RAB38P57729 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC18.38■□□□□ 0.53
RAB38P57729 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC18.38■□□□□ 0.53
RAB38P57729 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC18.38■□□□□ 0.53
RAB38P57729 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.38■□□□□ 0.53
RAB38P57729 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
RAB38P57729 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC18.38■□□□□ 0.53
RAB38P57729 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
RAB38P57729 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RAB38P57729 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.38■□□□□ 0.53
RAB38P57729 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RAB38P57729 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RAB38P57729 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
RAB38P57729 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.37■□□□□ 0.53
RAB38P57729 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RAB38P57729 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.37■□□□□ 0.53
RAB38P57729 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RAB38P57729 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RAB38P57729 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RAB38P57729 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RAB38P57729 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RAB38P57729 AL353807.1-201ENST00000427475 662 ntBASIC18.37■□□□□ 0.53
RAB38P57729 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms