Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC18.47■□□□□ 0.55
NR1H2P55055 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.47■□□□□ 0.55
NR1H2P55055 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NR1H2P55055 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
NR1H2P55055 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.47■□□□□ 0.55
NR1H2P55055 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.47■□□□□ 0.55
NR1H2P55055 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NR1H2P55055 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NR1H2P55055 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.47■□□□□ 0.55
NR1H2P55055 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NR1H2P55055 AC009113.1-201ENST00000570267 2443 ntBASIC18.47■□□□□ 0.55
NR1H2P55055 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC18.47■□□□□ 0.55
NR1H2P55055 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC18.47■□□□□ 0.55
NR1H2P55055 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
NR1H2P55055 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC18.47■□□□□ 0.55
NR1H2P55055 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.47■□□□□ 0.55
NR1H2P55055 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
NR1H2P55055 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
NR1H2P55055 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
NR1H2P55055 CROCCP3-202ENST00000420820 1947 ntBASIC18.47■□□□□ 0.55
NR1H2P55055 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NR1H2P55055 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC18.47■□□□□ 0.55
NR1H2P55055 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.46■□□□□ 0.55
NR1H2P55055 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
NR1H2P55055 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NR1H2P55055 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.46■□□□□ 0.55
NR1H2P55055 AC104581.1-202ENST00000635932 2618 ntBASIC18.46■□□□□ 0.55
NR1H2P55055 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
NR1H2P55055 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.46■□□□□ 0.55
NR1H2P55055 AL691432.2-201ENST00000607222 2038 ntBASIC18.46■□□□□ 0.55
NR1H2P55055 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NR1H2P55055 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.46■□□□□ 0.55
NR1H2P55055 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NR1H2P55055 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
NR1H2P55055 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
NR1H2P55055 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC18.46■□□□□ 0.55
NR1H2P55055 BRI3-207ENST00000539286 699 ntTSL 2 BASIC18.46■□□□□ 0.55
NR1H2P55055 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
NR1H2P55055 DUX4L16-201ENST00000555130 1264 ntBASIC18.46■□□□□ 0.55
NR1H2P55055 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC18.46■□□□□ 0.55
NR1H2P55055 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC18.46■□□□□ 0.55
NR1H2P55055 AL121832.2-201ENST00000610979 668 ntBASIC18.46■□□□□ 0.55
NR1H2P55055 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC18.46■□□□□ 0.55
NR1H2P55055 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NR1H2P55055 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.46■□□□□ 0.55
NR1H2P55055 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.46■□□□□ 0.55
NR1H2P55055 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC18.46■□□□□ 0.55
NR1H2P55055 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NR1H2P55055 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
NR1H2P55055 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.46■□□□□ 0.55
NR1H2P55055 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.46■□□□□ 0.54
NR1H2P55055 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC18.46■□□□□ 0.54
NR1H2P55055 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.45■□□□□ 0.54
NR1H2P55055 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
NR1H2P55055 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.45■□□□□ 0.54
NR1H2P55055 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NR1H2P55055 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NR1H2P55055 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NR1H2P55055 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
NR1H2P55055 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NR1H2P55055 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
NR1H2P55055 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
NR1H2P55055 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NR1H2P55055 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
NR1H2P55055 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC18.45■□□□□ 0.54
NR1H2P55055 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC18.45■□□□□ 0.54
NR1H2P55055 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC18.45■□□□□ 0.54
NR1H2P55055 PARP1-210ENST00000629232 477 ntTSL 5 BASIC18.45■□□□□ 0.54
NR1H2P55055 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.45■□□□□ 0.54
NR1H2P55055 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
NR1H2P55055 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
NR1H2P55055 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
NR1H2P55055 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
NR1H2P55055 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NR1H2P55055 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
NR1H2P55055 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.44■□□□□ 0.54
NR1H2P55055 STAC-204ENST00000457375 1366 ntTSL 2 BASIC18.44■□□□□ 0.54
NR1H2P55055 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NR1H2P55055 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.44■□□□□ 0.54
NR1H2P55055 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.44■□□□□ 0.54
NR1H2P55055 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
NR1H2P55055 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
NR1H2P55055 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
NR1H2P55055 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC18.44■□□□□ 0.54
NR1H2P55055 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC18.44■□□□□ 0.54
NR1H2P55055 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
NR1H2P55055 AC053503.5-201ENST00000601508 636 ntBASIC18.44■□□□□ 0.54
NR1H2P55055 AC005181.1-201ENST00000604782 1256 ntBASIC18.44■□□□□ 0.54
NR1H2P55055 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC18.44■□□□□ 0.54
NR1H2P55055 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
NR1H2P55055 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.44■□□□□ 0.54
NR1H2P55055 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.44■□□□□ 0.54
NR1H2P55055 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
NR1H2P55055 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
NR1H2P55055 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NR1H2P55055 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC18.44■□□□□ 0.54
NR1H2P55055 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
NR1H2P55055 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC18.43■□□□□ 0.54
NR1H2P55055 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
NR1H2P55055 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms