Protein–RNA interactions for Protein: Q9NRQ5

SMCO4, Single-pass membrane and coiled-coil domain-containing protein 4, humanhuman

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4Q9NRQ5 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SMCO4Q9NRQ5 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SMCO4Q9NRQ5 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
SMCO4Q9NRQ5 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SMCO4Q9NRQ5 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SMCO4Q9NRQ5 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SMCO4Q9NRQ5 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SMCO4Q9NRQ5 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
SMCO4Q9NRQ5 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC15.41■□□□□ 0.06
SMCO4Q9NRQ5 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC15.41■□□□□ 0.06
SMCO4Q9NRQ5 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
SMCO4Q9NRQ5 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SMCO4Q9NRQ5 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SMCO4Q9NRQ5 CD276-203ENST00000537340 2439 ntTSL 2 BASIC15.41■□□□□ 0.06
SMCO4Q9NRQ5 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SMCO4Q9NRQ5 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SMCO4Q9NRQ5 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SMCO4Q9NRQ5 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC15.41■□□□□ 0.06
SMCO4Q9NRQ5 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SMCO4Q9NRQ5 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
SMCO4Q9NRQ5 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC15.41■□□□□ 0.06
SMCO4Q9NRQ5 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
SMCO4Q9NRQ5 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SMCO4Q9NRQ5 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SMCO4Q9NRQ5 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SMCO4Q9NRQ5 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
SMCO4Q9NRQ5 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC15.41■□□□□ 0.06
SMCO4Q9NRQ5 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SMCO4Q9NRQ5 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SMCO4Q9NRQ5 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
SMCO4Q9NRQ5 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC15.41■□□□□ 0.06
SMCO4Q9NRQ5 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SMCO4Q9NRQ5 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
SMCO4Q9NRQ5 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SMCO4Q9NRQ5 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
SMCO4Q9NRQ5 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC15.4■□□□□ 0.06
SMCO4Q9NRQ5 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SMCO4Q9NRQ5 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SMCO4Q9NRQ5 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SMCO4Q9NRQ5 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SMCO4Q9NRQ5 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SMCO4Q9NRQ5 STAC-204ENST00000457375 1366 ntTSL 2 BASIC15.4■□□□□ 0.06
SMCO4Q9NRQ5 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
SMCO4Q9NRQ5 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SMCO4Q9NRQ5 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC15.4■□□□□ 0.06
SMCO4Q9NRQ5 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SMCO4Q9NRQ5 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC15.4■□□□□ 0.06
SMCO4Q9NRQ5 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC15.4■□□□□ 0.06
SMCO4Q9NRQ5 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC15.4■□□□□ 0.06
SMCO4Q9NRQ5 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC15.4■□□□□ 0.06
SMCO4Q9NRQ5 AL391005.1-201ENST00000623953 2435 ntBASIC15.4■□□□□ 0.06
SMCO4Q9NRQ5 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SMCO4Q9NRQ5 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
SMCO4Q9NRQ5 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SMCO4Q9NRQ5 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SMCO4Q9NRQ5 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC15.4■□□□□ 0.06
SMCO4Q9NRQ5 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SMCO4Q9NRQ5 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SMCO4Q9NRQ5 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SMCO4Q9NRQ5 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SMCO4Q9NRQ5 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
SMCO4Q9NRQ5 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
SMCO4Q9NRQ5 AL356309.3-201ENST00000624132 1934 ntBASIC15.39■□□□□ 0.05
SMCO4Q9NRQ5 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
SMCO4Q9NRQ5 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SMCO4Q9NRQ5 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC15.39■□□□□ 0.05
SMCO4Q9NRQ5 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SMCO4Q9NRQ5 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SMCO4Q9NRQ5 PKD1P5-201ENST00000532415 10291 ntBASIC15.39■□□□□ 0.05
SMCO4Q9NRQ5 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SMCO4Q9NRQ5 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SMCO4Q9NRQ5 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SMCO4Q9NRQ5 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
SMCO4Q9NRQ5 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SMCO4Q9NRQ5 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SMCO4Q9NRQ5 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC15.39■□□□□ 0.05
SMCO4Q9NRQ5 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
SMCO4Q9NRQ5 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SMCO4Q9NRQ5 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SMCO4Q9NRQ5 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC15.39■□□□□ 0.05
SMCO4Q9NRQ5 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
SMCO4Q9NRQ5 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SMCO4Q9NRQ5 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SMCO4Q9NRQ5 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SMCO4Q9NRQ5 ABALON-201ENST00000629058 1903 ntBASIC15.39■□□□□ 0.05
SMCO4Q9NRQ5 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SMCO4Q9NRQ5 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
SMCO4Q9NRQ5 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
SMCO4Q9NRQ5 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC15.39■□□□□ 0.05
SMCO4Q9NRQ5 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
SMCO4Q9NRQ5 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SMCO4Q9NRQ5 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SMCO4Q9NRQ5 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SMCO4Q9NRQ5 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC15.38■□□□□ 0.05
SMCO4Q9NRQ5 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
SMCO4Q9NRQ5 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SMCO4Q9NRQ5 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SMCO4Q9NRQ5 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SMCO4Q9NRQ5 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC15.38■□□□□ 0.05
SMCO4Q9NRQ5 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms