Protein–RNA interactions for Protein: Q8TB92

HMGCLL1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1Q8TB92 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HMGCLL1Q8TB92 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
HMGCLL1Q8TB92 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
HMGCLL1Q8TB92 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
HMGCLL1Q8TB92 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HMGCLL1Q8TB92 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
HMGCLL1Q8TB92 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HMGCLL1Q8TB92 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HMGCLL1Q8TB92 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
HMGCLL1Q8TB92 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC19.22■□□□□ 0.67
HMGCLL1Q8TB92 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HMGCLL1Q8TB92 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.22■□□□□ 0.67
HMGCLL1Q8TB92 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
HMGCLL1Q8TB92 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HMGCLL1Q8TB92 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HMGCLL1Q8TB92 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HMGCLL1Q8TB92 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HMGCLL1Q8TB92 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC19.22■□□□□ 0.67
HMGCLL1Q8TB92 KRT17P3-201ENST00000420566 1262 ntBASIC19.22■□□□□ 0.67
HMGCLL1Q8TB92 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HMGCLL1Q8TB92 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC19.22■□□□□ 0.67
HMGCLL1Q8TB92 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC19.22■□□□□ 0.67
HMGCLL1Q8TB92 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC19.22■□□□□ 0.67
HMGCLL1Q8TB92 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HMGCLL1Q8TB92 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HMGCLL1Q8TB92 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HMGCLL1Q8TB92 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC19.22■□□□□ 0.67
HMGCLL1Q8TB92 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HMGCLL1Q8TB92 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
HMGCLL1Q8TB92 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HMGCLL1Q8TB92 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
HMGCLL1Q8TB92 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HMGCLL1Q8TB92 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.22■□□□□ 0.67
HMGCLL1Q8TB92 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.21■□□□□ 0.67
HMGCLL1Q8TB92 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.21■□□□□ 0.67
HMGCLL1Q8TB92 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HMGCLL1Q8TB92 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HMGCLL1Q8TB92 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.21■□□□□ 0.67
HMGCLL1Q8TB92 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HMGCLL1Q8TB92 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
HMGCLL1Q8TB92 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HMGCLL1Q8TB92 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HMGCLL1Q8TB92 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HMGCLL1Q8TB92 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.21■□□□□ 0.67
HMGCLL1Q8TB92 TSPY20P-201ENST00000450910 630 ntBASIC19.21■□□□□ 0.67
HMGCLL1Q8TB92 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC19.21■□□□□ 0.67
HMGCLL1Q8TB92 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HMGCLL1Q8TB92 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC19.21■□□□□ 0.67
HMGCLL1Q8TB92 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
HMGCLL1Q8TB92 AL121829.2-201ENST00000620908 328 ntBASIC19.21■□□□□ 0.67
HMGCLL1Q8TB92 Z82202.1-201ENST00000623446 1880 ntBASIC19.21■□□□□ 0.67
HMGCLL1Q8TB92 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.21■□□□□ 0.67
HMGCLL1Q8TB92 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
HMGCLL1Q8TB92 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC19.21■□□□□ 0.67
HMGCLL1Q8TB92 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
HMGCLL1Q8TB92 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.2■□□□□ 0.66
HMGCLL1Q8TB92 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HMGCLL1Q8TB92 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.2■□□□□ 0.66
HMGCLL1Q8TB92 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.2■□□□□ 0.66
HMGCLL1Q8TB92 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC19.2■□□□□ 0.66
HMGCLL1Q8TB92 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HMGCLL1Q8TB92 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
HMGCLL1Q8TB92 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HMGCLL1Q8TB92 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HMGCLL1Q8TB92 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HMGCLL1Q8TB92 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC19.2■□□□□ 0.66
HMGCLL1Q8TB92 CALM3-202ENST00000391918 702 ntTSL 2 BASIC19.2■□□□□ 0.66
HMGCLL1Q8TB92 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC19.2■□□□□ 0.66
HMGCLL1Q8TB92 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC19.2■□□□□ 0.66
HMGCLL1Q8TB92 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC19.2■□□□□ 0.66
HMGCLL1Q8TB92 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC19.2■□□□□ 0.66
HMGCLL1Q8TB92 PHGDH-210ENST00000641115 1638 ntBASIC19.2■□□□□ 0.66
HMGCLL1Q8TB92 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HMGCLL1Q8TB92 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HMGCLL1Q8TB92 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HMGCLL1Q8TB92 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
HMGCLL1Q8TB92 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HMGCLL1Q8TB92 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.2■□□□□ 0.66
HMGCLL1Q8TB92 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.19■□□□□ 0.66
HMGCLL1Q8TB92 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HMGCLL1Q8TB92 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC19.19■□□□□ 0.66
HMGCLL1Q8TB92 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC19.19■□□□□ 0.66
HMGCLL1Q8TB92 AC116351.2-201ENST00000606540 1585 ntBASIC19.19■□□□□ 0.66
HMGCLL1Q8TB92 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.19■□□□□ 0.66
HMGCLL1Q8TB92 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
HMGCLL1Q8TB92 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
HMGCLL1Q8TB92 GOLGA2P11-201ENST00000562660 1621 ntBASIC19.19■□□□□ 0.66
HMGCLL1Q8TB92 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HMGCLL1Q8TB92 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HMGCLL1Q8TB92 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HMGCLL1Q8TB92 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC19.19■□□□□ 0.66
HMGCLL1Q8TB92 FAM201B-201ENST00000458407 597 ntBASIC19.19■□□□□ 0.66
HMGCLL1Q8TB92 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC19.19■□□□□ 0.66
HMGCLL1Q8TB92 AC069544.1-201ENST00000609399 999 ntBASIC19.19■□□□□ 0.66
HMGCLL1Q8TB92 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HMGCLL1Q8TB92 AL121906.2-201ENST00000621597 723 ntBASIC19.19■□□□□ 0.66
HMGCLL1Q8TB92 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.19■□□□□ 0.66
HMGCLL1Q8TB92 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HMGCLL1Q8TB92 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HMGCLL1Q8TB92 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms