Protein–RNA interactions for Protein: P23396

RPS3, 40S ribosomal protein S3, humanhuman

Known RBP eCLIP

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3P23396 ITIH3-201ENST00000416872 2220 ntTSL 2 BASIC10.94□□□□□ -0.663e-7■■■■□ 22.2
RPS3P23396 ITIH3-202ENST00000449956 3007 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.073e-7■■■■□ 22.2
RPS3P23396 ITIH3-211ENST00000621946 3038 ntTSL 1 (best) BASIC8.29□□□□□ -1.083e-7■■■■□ 22.2
RPS3P23396 CP-207ENST00000473296 496 ntTSL 30.71□□□□□ -2.34e-11■■■■□ 22.2
RPS3P23396 CP-208ENST00000474204 712 ntTSL 20.26□□□□□ -2.374e-11■■■■□ 22.2
RPS3P23396 TCIRG1-211ENST00000530449 525 ntTSL 1 (best)20.82■□□□□ 0.924e-6■■■■□ 22.2
RPS3P23396 TCIRG1-212ENST00000530802 223 ntTSL 1 (best)17.38■□□□□ 0.374e-6■■■■□ 22.2
RPS3P23396 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.184e-6■■■■□ 22.2
RPS3P23396 TCIRG1-210ENST00000530063 220 ntTSL 1 (best)1.66□□□□□ -2.144e-6■■■■□ 22.2
RPS3P23396 IFI30-203ENST00000600463 2116 ntTSL 212.91□□□□□ -0.343e-6■■■■□ 22.2
RPS3P23396 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.047e-8■■■■□ 22.2
RPS3P23396 SCAMP2-203ENST00000563663 1787 ntTSL 514.4□□□□□ -0.17e-8■■■■□ 22.2
RPS3P23396 SCAMP2-204ENST00000563829 3162 ntTSL 212.03□□□□□ -0.487e-8■■■■□ 22.2
RPS3P23396 SCAMP2-207ENST00000566480 2476 ntTSL 512.01□□□□□ -0.497e-8■■■■□ 22.2
RPS3P23396 SCAMP2-212ENST00000569904 858 ntTSL 511.91□□□□□ -0.57e-8■■■■□ 22.2
RPS3P23396 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.131e-8■■■■□ 22.2
RPS3P23396 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -01e-8■■■■□ 22.2
RPS3P23396 RNASE4-201ENST00000397995 853 ntAPPRIS P1 TSL 2 BASIC9.45□□□□□ -0.91e-8■■■■□ 22.2
RPS3P23396 GDF15-203ENST00000595973 890 ntTSL 518.17■□□□□ 0.53e-18■■■■□ 22.2
RPS3P23396 DDB1-202ENST00000414411 1904 ntTSL 29.75□□□□□ -0.852e-8■■■■□ 22.2
RPS3P23396 GLUL-211ENST00000489818 683 ntTSL 39.4□□□□□ -0.91e-12■■■■□ 22.2
RPS3P23396 ATP5C1-203ENST00000460362 414 ntTSL 314.05□□□□□ -0.163e-8■■■■□ 22.2
RPS3P23396 ATP5C1-205ENST00000462760 573 ntTSL 212.08□□□□□ -0.483e-8■■■■□ 22.2
RPS3P23396 COLGALT1-205ENST00000600474 552 ntTSL 48.4□□□□□ -1.061e-8■■■■□ 22.2
RPS3P23396 NPC1-211ENST00000591075 809 ntTSL 48.78□□□□□ -13e-8■■■■□ 22.2
RPS3P23396 PSMC2-204ENST00000457587 682 ntTSL 310.1□□□□□ -0.795e-7■■■■□ 22.2
RPS3P23396 PSMC2-202ENST00000425206 656 ntTSL 37.2□□□□□ -1.265e-7■■■■□ 22.2
RPS3P23396 COA3-202ENST00000586680 1374 ntTSL 218.9■□□□□ 0.621e-6■■■■□ 22.2
RPS3P23396 COA3-201ENST00000328434 771 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.671e-6■■■■□ 22.2
RPS3P23396 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC19.38■□□□□ 0.695e-7■■■■□ 22.2
RPS3P23396 ANXA7-203ENST00000394847 648 ntTSL 510.4□□□□□ -0.743e-11■■■■□ 22.2
RPS3P23396 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC25.77■■□□□ 1.722e-9■■■■□ 22.2
RPS3P23396 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.22e-9■■■■□ 22.2
RPS3P23396 GSTO1-205ENST00000470554 547 ntTSL 213.73□□□□□ -0.218e-9■■■■□ 22.2
RPS3P23396 DNASE2-202ENST00000586547 707 ntTSL 29.84□□□□□ -0.832e-9■■■■□ 22.2
RPS3P23396 ASH2L-205ENST00000518186 575 ntTSL 46.96□□□□□ -1.39e-7■■■■□ 22.2
RPS3P23396 CTNNA1-230ENST00000521724 2741 ntTSL 29.29□□□□□ -0.929e-8■■■■□ 22.2
RPS3P23396 CTNNA1-201ENST00000302763 3756 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.249e-8■■■■□ 22.2
RPS3P23396 CTNNA1-244ENST00000627109 3831 ntTSL 5 BASIC7.09□□□□□ -1.279e-8■■■■□ 22.2
RPS3P23396 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.42e-7■■■■□ 22.2
RPS3P23396 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.45e-7■■■■□ 22.2
RPS3P23396 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.375e-7■■■■□ 22.2
RPS3P23396 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.355e-7■■■■□ 22.2
RPS3P23396 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.295e-7■■■■□ 22.2
RPS3P23396 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.295e-7■■■■□ 22.2
RPS3P23396 DAG1-218ENST00000515359 5576 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.55e-7■■■■□ 22.2
RPS3P23396 ASNS-217ENST00000495255 1678 ntTSL 211.52□□□□□ -0.573e-8■■■■□ 22.2
RPS3P23396 ASNS-207ENST00000437657 745 ntTSL 56.67□□□□□ -1.343e-8■■■■□ 22.2
RPS3P23396 ORM2-201ENST00000431067 760 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.644e-8■■■■□ 22.2
RPS3P23396 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC22.39■■□□□ 1.175e-8■■■■□ 22.1
RPS3P23396 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC17.47■□□□□ 0.395e-8■■■■□ 22.1
RPS3P23396 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC17.47■□□□□ 0.394e-8■■■■□ 22.1
RPS3P23396 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.155e-8■■■■□ 22.1
RPS3P23396 PYCR2-206ENST00000478402 3149 ntTSL 214.29□□□□□ -0.125e-8■■■■□ 22.1
RPS3P23396 PRDX2-203ENST00000466174 1717 ntTSL 1 (best)14.73□□□□□ -0.056e-8■■■■□ 22.1
RPS3P23396 PRDX2-201ENST00000301522 987 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.66e-8■■■■□ 22.1
RPS3P23396 PRDX2-202ENST00000334482 784 ntTSL 3 BASIC10.67□□□□□ -0.76e-8■■■■□ 22.1
RPS3P23396 HOOK2-213ENST00000589765 108 ntTSL 58.77□□□□□ -1.016e-8■■■■□ 22.1
RPS3P23396 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.29e-7■■■■□ 22.1
RPS3P23396 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.039e-7■■■■□ 22.1
RPS3P23396 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC14.55□□□□□ -0.089e-7■■■■□ 22.1
RPS3P23396 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.159e-7■■■■□ 22.1
RPS3P23396 HIST1H4E-201ENST00000615164 1487 ntAPPRIS P1 BASIC7.58□□□□□ -1.22e-32■■■■□ 22.1
RPS3P23396 LIMS1-208ENST00000428064 637 ntTSL 220.18■□□□□ 0.824e-8■■■■□ 22.1
RPS3P23396 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.174e-8■■■■□ 22.1
RPS3P23396 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.223e-7■■■■□ 22.1
RPS3P23396 CPVL-201ENST00000265394 2091 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.483e-7■■■■□ 22.1
RPS3P23396 CPVL-203ENST00000409850 2213 ntAPPRIS P1 TSL 2 BASIC10.12□□□□□ -0.793e-7■■■■□ 22.1
RPS3P23396 POLR2C-207ENST00000564651 720 ntTSL 212□□□□□ -0.499e-7■■■■□ 22.1
RPS3P23396 POLR2C-203ENST00000562953 806 ntTSL 211.71□□□□□ -0.539e-7■■■■□ 22.1
RPS3P23396 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.57■□□□□ 0.46e-9■■■■□ 22.1
RPS3P23396 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC14.57□□□□□ -0.086e-9■■■■□ 22.1
RPS3P23396 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.63■□□□□ 0.418e-7■■■■□ 22.1
RPS3P23396 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.038e-7■■■■□ 22.1
RPS3P23396 CP-203ENST00000460674 2269 ntTSL 1 (best)4.86□□□□□ -1.638e-8■■■■□ 22.1
RPS3P23396 CP-209ENST00000479771 1150 ntTSL 52.42□□□□□ -2.028e-8■■■■□ 22.1
RPS3P23396 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.382e-6■■■■□ 22.1
RPS3P23396 TMEM45B-204ENST00000527754 888 ntTSL 57.23□□□□□ -1.252e-6■■■■□ 22.1
RPS3P23396 ETS2-203ENST00000432278 1033 ntTSL 519.06■□□□□ 0.645e-11■■■■□ 22.1
RPS3P23396 OGFOD3-212ENST00000583897 896 ntTSL 518.2■□□□□ 0.55e-11■■■■□ 22.1
RPS3P23396 PDE3B-205ENST00000534317 5521 ntTSL 1 (best)17.9■□□□□ 0.465e-11■■■■□ 22.1
RPS3P23396 LAMB2-210ENST00000483057 558 ntTSL 214.72□□□□□ -0.052e-6■■■■□ 22.1
RPS3P23396 LAMB2-204ENST00000464891 732 ntTSL 413.56□□□□□ -0.242e-6■■■■□ 22.1
RPS3P23396 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.274e-6■■■■□ 22.1
RPS3P23396 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC13.34□□□□□ -0.274e-6■■■■□ 22.1
RPS3P23396 STIM1-209ENST00000527651 2184 ntTSL 1 (best) BASIC12.03□□□□□ -0.484e-6■■■■□ 22.1
RPS3P23396 TRMT112-204ENST00000537918 559 ntTSL 1 (best)18.32■□□□□ 0.523e-7■■■■□ 22.1
RPS3P23396 RPL9-207ENST00000506581 371 ntTSL 51.77□□□□□ -2.134e-14■■■■□ 22.1
RPS3P23396 AKR1B1-208ENST00000484592 639 ntTSL 217.01■□□□□ 0.314e-9■■■■□ 22.1
RPS3P23396 AKR1B1-207ENST00000467829 561 ntTSL 1 (best)13.17□□□□□ -0.34e-9■■■■□ 22.1
RPS3P23396 AKR1B1-202ENST00000426422 521 ntTSL 410.86□□□□□ -0.674e-9■■■■□ 22.1
RPS3P23396 CORO1C-218ENST00000552030 547 ntTSL 510.41□□□□□ -0.744e-9■■■■□ 22.1
RPS3P23396 CORO1C-209ENST00000547361 683 ntTSL 29.48□□□□□ -0.894e-9■■■■□ 22.1
RPS3P23396 MCM4-209ENST00000520637 839 ntTSL 210.04□□□□□ -0.82e-8■■■■□ 22.1
RPS3P23396 HIST1H2BK-201ENST00000356950 381 ntAPPRIS P1 BASIC13.11□□□□□ -0.312e-27■■■■□ 22.1
RPS3P23396 COCH-204ENST00000468826 2129 ntTSL 26.92□□□□□ -1.36e-6■■■■□ 22.1
RPS3P23396 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.923e-9■■■■□ 22.1
RPS3P23396 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.673e-9■■■■□ 22.1
RPS3P23396 YWHAZ-215ENST00000518736 883 ntTSL 316.5■□□□□ 0.233e-9■■■■□ 22.1
RPS3P23396 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.133e-9■■■■□ 22.1
Retrieved 100 of 24,271 protein–RNA pairs in 224.5 ms