RNA–Protein interactions for RNA: ENST00000566480.5

SCAMP2-207, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 5

Gene SCAMP2, Length 2,476 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-207ENST00000566480 NISCHQ9Y2I1 1504 aa26.18■■□□□ 1.78
SCAMP2-207ENST00000566480 CCDC180Q9P1Z9 1646 aa22.83■■□□□ 1.25
SCAMP2-207ENST00000566480 ABCC9O60706 1549 aa22.43■■□□□ 1.18
SCAMP2-207ENST00000566480 SHROOM4Q9ULL8 1493 aa22.23■■□□□ 1.15
SCAMP2-207ENST00000566480 ZCCHC6Q5VYS8 1495 aaKnown RBP22.07■■□□□ 1.12
SCAMP2-207ENST00000566480 DCAF8L2P0C7V8 631 aa21.99■■□□□ 1.11
SCAMP2-207ENST00000566480 SUPT5HO00267 1087 aaKnown RBP21.63■■□□□ 1.05
SCAMP2-207ENST00000566480 RB1CC1Q8TDY2 1594 aa21.4■■□□□ 1.02
SCAMP2-207ENST00000566480 DCAF1Q9Y4B6 1507 aa21.4■■□□□ 1.02
SCAMP2-207ENST00000566480 NACADO15069 1562 aa21.36■■□□□ 1.01
SCAMP2-207ENST00000566480 UNC13AQ9UPW8 1703 aa21.26■□□□□ 0.99
SCAMP2-207ENST00000566480 MYO15BQ96JP2 1530 aa21.16■□□□□ 0.98
SCAMP2-207ENST00000566480 SCRIBQ14160 1630 aa21.13■□□□□ 0.97
SCAMP2-207ENST00000566480 PABPN1Q86U42 306 aaKnown RBP eCLIP21.03■□□□□ 0.96
SCAMP2-207ENST00000566480 BICRAQ9NZM4 1560 aa20.96■□□□□ 0.95
SCAMP2-207ENST00000566480 CHIC1Q5VXU3 224 aa20.8■□□□□ 0.92
SCAMP2-207ENST00000566480 RSF1Q96T23 1441 aaPredicted RBP20.61■□□□□ 0.89
SCAMP2-207ENST00000566480 DNAJC5BQ9UF47 199 aa20.53■□□□□ 0.88
SCAMP2-207ENST00000566480 CECR2Q9BXF3 1484 aa20.51■□□□□ 0.87
SCAMP2-207ENST00000566480 MROH2BQ7Z745 1585 aa20.38■□□□□ 0.85
SCAMP2-207ENST00000566480 EIF4G1Q04637 1599 aaKnown RBP20.32■□□□□ 0.84
SCAMP2-207ENST00000566480 WIZO95785 1651 aa20.27■□□□□ 0.83
SCAMP2-207ENST00000566480 CC2D2AQ9P2K1 1620 aa20.25■□□□□ 0.83
SCAMP2-207ENST00000566480 LOC105371045A0A1W2PR82 267 aa20.24■□□□□ 0.83
SCAMP2-207ENST00000566480 TRIM41Q8WV44 630 aa20.12■□□□□ 0.81
SCAMP2-207ENST00000566480 BAZ1AQ9NRL2 1556 aaPredicted RBP20.12■□□□□ 0.81
SCAMP2-207ENST00000566480 SMARCA4P51532 1647 aa20.09■□□□□ 0.81
SCAMP2-207ENST00000566480 FAM9AQ8IZU1 332 aaPredicted RBP20.03■□□□□ 0.8
SCAMP2-207ENST00000566480 EHMT2Q96KQ7 1210 aa19.94■□□□□ 0.78
SCAMP2-207ENST00000566480 ATAD2BQ9ULI0 1458 aa19.88■□□□□ 0.77
SCAMP2-207ENST00000566480 TOP2AP11388 1531 aaKnown RBP19.88■□□□□ 0.77
SCAMP2-207ENST00000566480 PCGF6Q9BYE7 350 aa19.86■□□□□ 0.77
SCAMP2-207ENST00000566480 CCDC88BA6NC98 1476 aa19.83■□□□□ 0.77
SCAMP2-207ENST00000566480 SMARCA2P51531 1590 aa19.78■□□□□ 0.76
SCAMP2-207ENST00000566480 PEG3Q9GZU2 1588 aa19.75■□□□□ 0.75
SCAMP2-207ENST00000566480 NCAPD3P42695 1498 aa19.73■□□□□ 0.75
SCAMP2-207ENST00000566480 BAZ1BQ9UIG0 1483 aaKnown RBP19.72■□□□□ 0.75
SCAMP2-207ENST00000566480 ABCC8Q09428 1581 aa19.72■□□□□ 0.75
SCAMP2-207ENST00000566480 HMGXB3Q12766 1538 aa19.67■□□□□ 0.74
SCAMP2-207ENST00000566480 HRCP23327 699 aa19.54■□□□□ 0.72
SCAMP2-207ENST00000566480 NESP48681 1621 aa19.53■□□□□ 0.72
SCAMP2-207ENST00000566480 TRIM26Q12899 539 aaPredicted RBP19.48■□□□□ 0.71
SCAMP2-207ENST00000566480 SOGA1O94964 1423 aa19.46■□□□□ 0.71
SCAMP2-207ENST00000566480 PPARGC1BQ86YN6 1023 aaKnown RBP19.41■□□□□ 0.7
SCAMP2-207ENST00000566480 RUSC2Q8N2Y8 1516 aa19.4■□□□□ 0.7
SCAMP2-207ENST00000566480 WRNQ14191 1432 aaPredicted RBP eCLIP19.38■□□□□ 0.69
SCAMP2-207ENST00000566480 SYNJ1O43426 1573 aa19.3■□□□□ 0.68
SCAMP2-207ENST00000566480 KIF21AQ7Z4S6 1674 aa19.3■□□□□ 0.68
SCAMP2-207ENST00000566480 CSRNP3Q8WYN3 585 aa19.29■□□□□ 0.68
SCAMP2-207ENST00000566480 UBTFP17480 764 aaKnown RBP19.24■□□□□ 0.67
SCAMP2-207ENST00000566480 LAMC3Q9Y6N6 1575 aa19.21■□□□□ 0.67
SCAMP2-207ENST00000566480 CADPSQ9ULU8 1353 aa19.2■□□□□ 0.66
SCAMP2-207ENST00000566480 TTBK1Q5TCY1 1321 aaPredicted RBP19.19■□□□□ 0.66
SCAMP2-207ENST00000566480 ERCC6Q03468 1493 aa19.18■□□□□ 0.66
SCAMP2-207ENST00000566480 EEA1Q15075 1411 aa19.17■□□□□ 0.66
SCAMP2-207ENST00000566480 CEP162Q5TB80 1403 aa19.17■□□□□ 0.66
SCAMP2-207ENST00000566480 CFTRP13569 1480 aa19.14■□□□□ 0.65
SCAMP2-207ENST00000566480 TNIKQ9UKE5 1360 aa19.13■□□□□ 0.65
SCAMP2-207ENST00000566480 PRDM2Q13029 1718 aa19.11■□□□□ 0.65
SCAMP2-207ENST00000566480 THOC2Q8NI27 1593 aaKnown RBP19.09■□□□□ 0.65
SCAMP2-207ENST00000566480 GOLGA3Q08378 1498 aa19.09■□□□□ 0.65
SCAMP2-207ENST00000566480 FANCD2Q9BXW9 1451 aa19.06■□□□□ 0.64
SCAMP2-207ENST00000566480 TOP2BQ02880 1626 aa19.05■□□□□ 0.64
SCAMP2-207ENST00000566480 RANGAP1P46060 587 aaPredicted RBP19.05■□□□□ 0.64
SCAMP2-207ENST00000566480 PDS5BQ9NTI5 1447 aa19.01■□□□□ 0.63
SCAMP2-207ENST00000566480 CEP164Q9UPV0 1460 aa19.01■□□□□ 0.63
SCAMP2-207ENST00000566480 RAPGEF2Q9Y4G8 1499 aa18.99■□□□□ 0.63
SCAMP2-207ENST00000566480 CUX1P39880 1505 aa18.98■□□□□ 0.63
SCAMP2-207ENST00000566480 BIVM-ERCC5R4GMW8 1640 aa18.97■□□□□ 0.63
SCAMP2-207ENST00000566480 KIF21BO75037 1637 aa18.96■□□□□ 0.63
SCAMP2-207ENST00000566480 URB2Q14146 1524 aaKnown RBP18.95■□□□□ 0.62
SCAMP2-207ENST00000566480 MRC2Q9UBG0 1479 aa18.91■□□□□ 0.62
SCAMP2-207ENST00000566480 CLIP1P30622 1438 aa18.89■□□□□ 0.61
SCAMP2-207ENST00000566480 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.88■□□□□ 0.61
SCAMP2-207ENST00000566480 WDR62O43379 1518 aa18.87■□□□□ 0.61
SCAMP2-207ENST00000566480 ZEB1P37275 1124 aaPredicted RBP18.82■□□□□ 0.6
SCAMP2-207ENST00000566480 TOPBP1Q92547 1522 aa18.8■□□□□ 0.6
SCAMP2-207ENST00000566480 KIF27Q86VH2 1401 aa18.8■□□□□ 0.6
SCAMP2-207ENST00000566480 PRXQ9BXM0 1461 aa18.78■□□□□ 0.6
SCAMP2-207ENST00000566480 CUX2O14529 1486 aa18.77■□□□□ 0.6
SCAMP2-207ENST00000566480 CCER1Q8TC90 406 aaPredicted RBP18.76■□□□□ 0.59
SCAMP2-207ENST00000566480 DNMBPQ6XZF7 1577 aa18.75■□□□□ 0.59
SCAMP2-207ENST00000566480 VPS8Q8N3P4 1428 aa18.74■□□□□ 0.59
SCAMP2-207ENST00000566480 FGD5Q6ZNL6 1462 aa18.71■□□□□ 0.59
SCAMP2-207ENST00000566480 ERICH3Q5RHP9 1530 aa18.71■□□□□ 0.58
SCAMP2-207ENST00000566480 RAD54L2Q9Y4B4 1467 aa18.69■□□□□ 0.58
SCAMP2-207ENST00000566480 APLP2Q06481 763 aa18.69■□□□□ 0.58
SCAMP2-207ENST00000566480 POLA1P09884 1462 aaPredicted RBP18.67■□□□□ 0.58
SCAMP2-207ENST00000566480 ZNF608Q9ULD9 1512 aaPredicted RBP18.67■□□□□ 0.58
SCAMP2-207ENST00000566480 IGF1RP08069 1367 aa18.64■□□□□ 0.58
SCAMP2-207ENST00000566480 HNRNPUL2Q1KMD3 747 aaKnown RBP18.63■□□□□ 0.57
SCAMP2-207ENST00000566480 ARAP1Q96P48 1450 aa18.62■□□□□ 0.57
SCAMP2-207ENST00000566480 SLC24A1O60721 1099 aa18.62■□□□□ 0.57
SCAMP2-207ENST00000566480 TARBP1Q13395 1621 aaKnown RBP18.62■□□□□ 0.57
SCAMP2-207ENST00000566480 CARMIL1Q5VZK9 1371 aa18.56■□□□□ 0.56
SCAMP2-207ENST00000566480 EIF4G3O43432 1585 aaKnown RBP18.56■□□□□ 0.56
SCAMP2-207ENST00000566480 WDR97A6NE52 1622 aa18.55■□□□□ 0.56
SCAMP2-207ENST00000566480 KANK4Q5T7N3 995 aaPredicted RBP18.55■□□□□ 0.56
SCAMP2-207ENST00000566480 AQRO60306 1485 aaKnown RBP eCLIP18.54■□□□□ 0.565e-7■■■□□ 17.7
SCAMP2-207ENST00000566480 ARHGAP35Q9NRY4 1499 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms