RNA–Protein interactions for RNA: ENST00000449956.2

ITIH3-202, Transcript of inter-alpha-trypsin inhibitor heavy chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ITIH3, Length 3,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITIH3-202ENST00000449956 NISCHQ9Y2I1 1504 aa18.84■□□□□ 0.61
ITIH3-202ENST00000449956 DCAF8L2P0C7V8 631 aa16.37■□□□□ 0.21
ITIH3-202ENST00000449956 ABCC9O60706 1549 aa16.29■□□□□ 0.2
ITIH3-202ENST00000449956 CCDC180Q9P1Z9 1646 aa16.28■□□□□ 0.2
ITIH3-202ENST00000449956 SHROOM4Q9ULL8 1493 aa15.81■□□□□ 0.12
ITIH3-202ENST00000449956 ZCCHC6Q5VYS8 1495 aaKnown RBP15.71■□□□□ 0.11
ITIH3-202ENST00000449956 PABPN1Q86U42 306 aaKnown RBP eCLIP15.5■□□□□ 0.074e-12■■■□□ 15.1
ITIH3-202ENST00000449956 SCRIBQ14160 1630 aa15.42■□□□□ 0.06
ITIH3-202ENST00000449956 RB1CC1Q8TDY2 1594 aa15.35■□□□□ 0.05
ITIH3-202ENST00000449956 NACADO15069 1562 aa15.33■□□□□ 0.04
ITIH3-202ENST00000449956 DCAF1Q9Y4B6 1507 aa15.25■□□□□ 0.03
ITIH3-202ENST00000449956 SUPT5HO00267 1087 aaKnown RBP15.14■□□□□ 0.01
ITIH3-202ENST00000449956 UNC13AQ9UPW8 1703 aa15.12■□□□□ 0.01
ITIH3-202ENST00000449956 MYO15BQ96JP2 1530 aa15.11■□□□□ 0.01
ITIH3-202ENST00000449956 BICRAQ9NZM4 1560 aa15.01□□□□□ -0.01
ITIH3-202ENST00000449956 CECR2Q9BXF3 1484 aa14.93□□□□□ -0.02
ITIH3-202ENST00000449956 DNAJC5BQ9UF47 199 aa14.82□□□□□ -0.04
ITIH3-202ENST00000449956 MROH2BQ7Z745 1585 aa14.71□□□□□ -0.05
ITIH3-202ENST00000449956 RSF1Q96T23 1441 aaPredicted RBP14.62□□□□□ -0.07
ITIH3-202ENST00000449956 EIF4G1Q04637 1599 aaKnown RBP14.6□□□□□ -0.07
ITIH3-202ENST00000449956 WIZO95785 1651 aa14.58□□□□□ -0.08
ITIH3-202ENST00000449956 SMARCA4P51532 1647 aa14.54□□□□□ -0.08
ITIH3-202ENST00000449956 CHIC1Q5VXU3 224 aa14.53□□□□□ -0.08
ITIH3-202ENST00000449956 CC2D2AQ9P2K1 1620 aa14.51□□□□□ -0.09
ITIH3-202ENST00000449956 BAZ1AQ9NRL2 1556 aaPredicted RBP14.5□□□□□ -0.09
ITIH3-202ENST00000449956 ATAD2BQ9ULI0 1458 aa14.44□□□□□ -0.1
ITIH3-202ENST00000449956 BAZ1BQ9UIG0 1483 aaKnown RBP14.37□□□□□ -0.11
ITIH3-202ENST00000449956 SMARCA2P51531 1590 aa14.27□□□□□ -0.13
ITIH3-202ENST00000449956 LOC105371045A0A1W2PR82 267 aa14.26□□□□□ -0.13
ITIH3-202ENST00000449956 CCDC88BA6NC98 1476 aa14.24□□□□□ -0.13
ITIH3-202ENST00000449956 NCAPD3P42695 1498 aa14.24□□□□□ -0.13
ITIH3-202ENST00000449956 NESP48681 1621 aa14.21□□□□□ -0.13
ITIH3-202ENST00000449956 TOP2AP11388 1531 aaKnown RBP14.2□□□□□ -0.14
ITIH3-202ENST00000449956 PCGF6Q9BYE7 350 aa14.18□□□□□ -0.14
ITIH3-202ENST00000449956 PEG3Q9GZU2 1588 aa14.16□□□□□ -0.14
ITIH3-202ENST00000449956 EHMT2Q96KQ7 1210 aa14.11□□□□□ -0.15
ITIH3-202ENST00000449956 HMGXB3Q12766 1538 aa14.1□□□□□ -0.15
ITIH3-202ENST00000449956 FAM9AQ8IZU1 332 aaPredicted RBP14.07□□□□□ -0.16
ITIH3-202ENST00000449956 ABCC8Q09428 1581 aa14□□□□□ -0.17
ITIH3-202ENST00000449956 HRCP23327 699 aa14□□□□□ -0.17
ITIH3-202ENST00000449956 TRIM41Q8WV44 630 aa13.99□□□□□ -0.17
ITIH3-202ENST00000449956 CADPSQ9ULU8 1353 aa13.99□□□□□ -0.17
ITIH3-202ENST00000449956 PPARGC1BQ86YN6 1023 aaKnown RBP13.93□□□□□ -0.18
ITIH3-202ENST00000449956 ERCC6Q03468 1493 aa13.91□□□□□ -0.18
ITIH3-202ENST00000449956 CFTRP13569 1480 aa13.9□□□□□ -0.18
ITIH3-202ENST00000449956 FANCD2Q9BXW9 1451 aa13.87□□□□□ -0.19
ITIH3-202ENST00000449956 KIF21AQ7Z4S6 1674 aa13.82□□□□□ -0.2
ITIH3-202ENST00000449956 PDS5BQ9NTI5 1447 aa13.78□□□□□ -0.2
ITIH3-202ENST00000449956 WRNQ14191 1432 aaPredicted RBP eCLIP13.77□□□□□ -0.21
ITIH3-202ENST00000449956 CEP164Q9UPV0 1460 aa13.77□□□□□ -0.21
ITIH3-202ENST00000449956 LAMC3Q9Y6N6 1575 aa13.75□□□□□ -0.21
ITIH3-202ENST00000449956 TRIM26Q12899 539 aaPredicted RBP13.75□□□□□ -0.21
ITIH3-202ENST00000449956 SYNJ1O43426 1573 aa13.74□□□□□ -0.21
ITIH3-202ENST00000449956 URB2Q14146 1524 aaKnown RBP13.74□□□□□ -0.21
ITIH3-202ENST00000449956 RAD54L2Q9Y4B4 1467 aa13.73□□□□□ -0.21
ITIH3-202ENST00000449956 CUX1P39880 1505 aa13.73□□□□□ -0.21
ITIH3-202ENST00000449956 RANGAP1P46060 587 aaPredicted RBP13.72□□□□□ -0.21
ITIH3-202ENST00000449956 RUSC2Q8N2Y8 1516 aa13.7□□□□□ -0.22
ITIH3-202ENST00000449956 SOGA1O94964 1423 aa13.69□□□□□ -0.22
ITIH3-202ENST00000449956 TDRD9Q8NDG6 1382 aaKnown RBP13.68□□□□□ -0.22
ITIH3-202ENST00000449956 TOPBP1Q92547 1522 aa13.66□□□□□ -0.22
ITIH3-202ENST00000449956 FGD5Q6ZNL6 1462 aa13.65□□□□□ -0.22
ITIH3-202ENST00000449956 MRC2Q9UBG0 1479 aa13.63□□□□□ -0.23
ITIH3-202ENST00000449956 FBLN2P98095 1184 aa13.62□□□□□ -0.23
ITIH3-202ENST00000449956 POLA1P09884 1462 aaPredicted RBP13.6□□□□□ -0.23
ITIH3-202ENST00000449956 TTBK1Q5TCY1 1321 aaPredicted RBP13.6□□□□□ -0.23
ITIH3-202ENST00000449956 AQRO60306 1485 aaKnown RBP eCLIP13.6□□□□□ -0.231e-7■■■■■ 27
ITIH3-202ENST00000449956 ZNF608Q9ULD9 1512 aaPredicted RBP13.6□□□□□ -0.23
ITIH3-202ENST00000449956 PRDM2Q13029 1718 aa13.57□□□□□ -0.24
ITIH3-202ENST00000449956 CUX2O14529 1486 aa13.56□□□□□ -0.24
ITIH3-202ENST00000449956 THOC2Q8NI27 1593 aaKnown RBP13.56□□□□□ -0.24
ITIH3-202ENST00000449956 DNMBPQ6XZF7 1577 aa13.54□□□□□ -0.24
ITIH3-202ENST00000449956 TOP2BQ02880 1626 aa13.54□□□□□ -0.24
ITIH3-202ENST00000449956 WDR62O43379 1518 aa13.49□□□□□ -0.25
ITIH3-202ENST00000449956 UBTFP17480 764 aaKnown RBP13.47□□□□□ -0.25
ITIH3-202ENST00000449956 CSRNP3Q8WYN3 585 aa13.46□□□□□ -0.25
ITIH3-202ENST00000449956 BIVM-ERCC5R4GMW8 1640 aa13.46□□□□□ -0.26
ITIH3-202ENST00000449956 KIF27Q86VH2 1401 aa13.4□□□□□ -0.27
ITIH3-202ENST00000449956 P3H3Q8IVL6 736 aa13.39□□□□□ -0.27
ITIH3-202ENST00000449956 IGF1RP08069 1367 aa13.39□□□□□ -0.27
ITIH3-202ENST00000449956 TARBP1Q13395 1621 aaKnown RBP13.39□□□□□ -0.27
ITIH3-202ENST00000449956 GAPVD1Q14C86 1478 aa13.39□□□□□ -0.27
ITIH3-202ENST00000449956 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.39□□□□□ -0.27
ITIH3-202ENST00000449956 CHMP7Q8WUX9 453 aaPredicted RBP13.38□□□□□ -0.27
ITIH3-202ENST00000449956 IFT140Q96RY7 1462 aa13.37□□□□□ -0.27
ITIH3-202ENST00000449956 ABCA10Q8WWZ4 1543 aa13.36□□□□□ -0.27
ITIH3-202ENST00000449956 RAPGEF2Q9Y4G8 1499 aa13.35□□□□□ -0.27
ITIH3-202ENST00000449956 EIF4G3O43432 1585 aaKnown RBP13.35□□□□□ -0.27
ITIH3-202ENST00000449956 SNAPC4Q5SXM2 1469 aa13.34□□□□□ -0.27
ITIH3-202ENST00000449956 ZEB1P37275 1124 aaPredicted RBP13.33□□□□□ -0.28
ITIH3-202ENST00000449956 CARMIL1Q5VZK9 1371 aa13.33□□□□□ -0.28
ITIH3-202ENST00000449956 ARID3CA6NKF2 412 aa13.31□□□□□ -0.28
ITIH3-202ENST00000449956 CCER1Q8TC90 406 aaPredicted RBP13.3□□□□□ -0.28
ITIH3-202ENST00000449956 CEP162Q5TB80 1403 aa13.29□□□□□ -0.28
ITIH3-202ENST00000449956 WDR97A6NE52 1622 aa13.26□□□□□ -0.29
ITIH3-202ENST00000449956 GRIN2BQ13224 1484 aa13.26□□□□□ -0.29
ITIH3-202ENST00000449956 ABCA5Q8WWZ7 1642 aa13.25□□□□□ -0.29
ITIH3-202ENST00000449956 ATP1B4Q9UN42 357 aaPredicted RBP13.24□□□□□ -0.29
ITIH3-202ENST00000449956 PBRM1Q86U86 1689 aa13.22□□□□□ -0.29
ITIH3-202ENST00000449956 TNIKQ9UKE5 1360 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms