Protein–RNA interactions for Protein: P20783

NTF3, Neurotrophin-3, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NTF3P20783 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
NTF3P20783 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
NTF3P20783 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NTF3P20783 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC14.87□□□□□ -0.03
NTF3P20783 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC14.87□□□□□ -0.03
NTF3P20783 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NTF3P20783 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
NTF3P20783 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC14.87□□□□□ -0.03
NTF3P20783 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC14.86□□□□□ -0.03
NTF3P20783 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC14.86□□□□□ -0.03
NTF3P20783 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
NTF3P20783 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
NTF3P20783 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NTF3P20783 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NTF3P20783 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC14.86□□□□□ -0.03
NTF3P20783 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NTF3P20783 PTGES2-AS1-201ENST00000443493 2100 ntBASIC14.86□□□□□ -0.03
NTF3P20783 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NTF3P20783 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
NTF3P20783 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
NTF3P20783 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NTF3P20783 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
NTF3P20783 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC14.86□□□□□ -0.03
NTF3P20783 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC14.86□□□□□ -0.03
NTF3P20783 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC14.86□□□□□ -0.03
NTF3P20783 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC14.86□□□□□ -0.03
NTF3P20783 AC053503.5-201ENST00000601508 636 ntBASIC14.86□□□□□ -0.03
NTF3P20783 AL138781.2-201ENST00000617896 1843 ntBASIC14.86□□□□□ -0.03
NTF3P20783 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NTF3P20783 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
NTF3P20783 Z82202.1-201ENST00000623446 1880 ntBASIC14.86□□□□□ -0.03
NTF3P20783 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC14.86□□□□□ -0.03
NTF3P20783 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NTF3P20783 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
NTF3P20783 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
NTF3P20783 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
NTF3P20783 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NTF3P20783 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
NTF3P20783 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
NTF3P20783 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
NTF3P20783 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
NTF3P20783 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC14.85□□□□□ -0.03
NTF3P20783 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
NTF3P20783 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
NTF3P20783 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NTF3P20783 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NTF3P20783 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
NTF3P20783 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC14.85□□□□□ -0.03
NTF3P20783 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
NTF3P20783 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NTF3P20783 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
NTF3P20783 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NTF3P20783 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
NTF3P20783 PTMA-205ENST00000410064 814 ntTSL 2 BASIC14.85□□□□□ -0.03
NTF3P20783 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
NTF3P20783 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
NTF3P20783 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC14.85□□□□□ -0.03
NTF3P20783 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC14.85□□□□□ -0.03
NTF3P20783 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC14.85□□□□□ -0.03
NTF3P20783 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NTF3P20783 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
NTF3P20783 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
NTF3P20783 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
NTF3P20783 H19-201ENST00000411754 1788 ntTSL 5 BASIC14.85□□□□□ -0.03
NTF3P20783 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NTF3P20783 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
NTF3P20783 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NTF3P20783 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NTF3P20783 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NTF3P20783 AP000997.3-201ENST00000623333 2250 ntBASIC14.85□□□□□ -0.03
NTF3P20783 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC14.85□□□□□ -0.03
NTF3P20783 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
NTF3P20783 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
NTF3P20783 TMEM179-206ENST00000616017 1645 ntBASIC14.84□□□□□ -0.03
NTF3P20783 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC14.84□□□□□ -0.03
NTF3P20783 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NTF3P20783 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
NTF3P20783 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC14.84□□□□□ -0.03
NTF3P20783 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
NTF3P20783 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NTF3P20783 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
NTF3P20783 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NTF3P20783 AC079598.2-202ENST00000546624 1451 ntBASIC14.84□□□□□ -0.03
NTF3P20783 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
NTF3P20783 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
NTF3P20783 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NTF3P20783 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC14.84□□□□□ -0.03
NTF3P20783 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
NTF3P20783 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NTF3P20783 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NTF3P20783 EEF1DP3-203ENST00000566025 782 ntBASIC14.84□□□□□ -0.03
NTF3P20783 AC126544.1-201ENST00000580842 1059 ntBASIC14.84□□□□□ -0.03
NTF3P20783 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC14.84□□□□□ -0.03
NTF3P20783 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC14.84□□□□□ -0.03
NTF3P20783 MIR2861-201ENST00000636310 90 ntBASIC14.84□□□□□ -0.03
NTF3P20783 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NTF3P20783 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NTF3P20783 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
NTF3P20783 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
NTF3P20783 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms