Protein–RNA interactions for Protein: O76031

CLPX, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPXO76031 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CLPXO76031 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLPXO76031 AC012313.1-201ENST00000593393 3059 ntBASIC17.74■□□□□ 0.43
CLPXO76031 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.74■□□□□ 0.43
CLPXO76031 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLPXO76031 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CLPXO76031 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
CLPXO76031 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLPXO76031 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.74■□□□□ 0.43
CLPXO76031 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLPXO76031 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLPXO76031 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CLPXO76031 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLPXO76031 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
CLPXO76031 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
CLPXO76031 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLPXO76031 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CLPXO76031 PRORSD1P-202ENST00000563365 2154 ntBASIC17.73■□□□□ 0.43
CLPXO76031 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
CLPXO76031 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC17.73■□□□□ 0.43
CLPXO76031 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC17.73■□□□□ 0.43
CLPXO76031 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.73■□□□□ 0.43
CLPXO76031 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLPXO76031 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
CLPXO76031 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.73■□□□□ 0.43
CLPXO76031 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
CLPXO76031 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC17.73■□□□□ 0.43
CLPXO76031 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLPXO76031 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.73■□□□□ 0.43
CLPXO76031 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLPXO76031 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
CLPXO76031 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLPXO76031 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLPXO76031 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
CLPXO76031 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
CLPXO76031 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLPXO76031 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLPXO76031 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
CLPXO76031 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC17.72■□□□□ 0.43
CLPXO76031 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLPXO76031 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLPXO76031 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLPXO76031 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLPXO76031 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
CLPXO76031 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLPXO76031 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLPXO76031 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
CLPXO76031 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLPXO76031 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLPXO76031 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CLPXO76031 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLPXO76031 MIR572-201ENST00000384983 95 ntBASIC17.72■□□□□ 0.43
CLPXO76031 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
CLPXO76031 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC17.72■□□□□ 0.43
CLPXO76031 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC17.72■□□□□ 0.43
CLPXO76031 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC17.72■□□□□ 0.43
CLPXO76031 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.72■□□□□ 0.43
CLPXO76031 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLPXO76031 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLPXO76031 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLPXO76031 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CLPXO76031 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC17.72■□□□□ 0.43
CLPXO76031 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLPXO76031 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLPXO76031 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
CLPXO76031 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.71■□□□□ 0.43
CLPXO76031 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLPXO76031 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLPXO76031 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
CLPXO76031 CD37-204ENST00000535669 1674 ntTSL 2 BASIC17.71■□□□□ 0.43
CLPXO76031 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.71■□□□□ 0.43
CLPXO76031 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLPXO76031 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
CLPXO76031 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLPXO76031 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC17.71■□□□□ 0.43
CLPXO76031 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLPXO76031 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLPXO76031 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLPXO76031 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC17.71■□□□□ 0.43
CLPXO76031 SMUG1P1-201ENST00000590640 811 ntBASIC17.71■□□□□ 0.43
CLPXO76031 AC105233.4-201ENST00000642045 216 ntBASIC17.71■□□□□ 0.43
CLPXO76031 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC17.71■□□□□ 0.43
CLPXO76031 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
CLPXO76031 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLPXO76031 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLPXO76031 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.71■□□□□ 0.43
CLPXO76031 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.71■□□□□ 0.42
CLPXO76031 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
CLPXO76031 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.42
CLPXO76031 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC17.71■□□□□ 0.42
CLPXO76031 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.42
CLPXO76031 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLPXO76031 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
CLPXO76031 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
CLPXO76031 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLPXO76031 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLPXO76031 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
CLPXO76031 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLPXO76031 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
CLPXO76031 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms